Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AL359740.1-201ENST00000624340 592 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
VPS25Q9BRG1 CASC19-280ENST00000642102 1351 ntBASIC0.04□□□□□ -2.4
VPS25Q9BRG1 BX322639.1-202ENST00000423987 2213 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 RNU6-511P-201ENST00000363496 107 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 RNU4-45P-201ENST00000365469 141 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 RNU6-378P-201ENST00000384324 107 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 RNU6-163P-201ENST00000384396 106 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 ELOCP17-201ENST00000414751 326 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 RPL22P18-201ENST00000417197 377 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AL360271.2-201ENST00000447710 161 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC113347.3-201ENST00000509113 148 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC105313.1-201ENST00000509121 353 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC067942.3-201ENST00000512025 362 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC109445.1-201ENST00000512356 383 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.03□□□□□ -2.4
VPS25Q9BRG1 MIR4431-201ENST00000579990 94 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC064872.1-201ENST00000604823 1072 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 PRELID3BP2-201ENST00000605362 201 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AL359821.1-201ENST00000605519 182 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 snoU13.31-201ENST00000607291 104 ntBASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.03□□□□□ -2.4
VPS25Q9BRG1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.03□□□□□ -2.4
VPS25Q9BRG1 MIR96-201ENST00000362288 78 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 Y_RNA.132-201ENST00000363421 102 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 RNU4-76P-201ENST00000364509 141 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 RNU6-692P-201ENST00000384496 107 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 RNU6-417P-201ENST00000384712 107 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 RSL24D1P8-201ENST00000434442 492 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 AC243964.1-201ENST00000441814 261 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 AC016717.1-201ENST00000448918 286 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 SNORA59A-201ENST00000459326 152 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 AC022447.4-201ENST00000504053 364 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 AC021146.8-201ENST00000507455 733 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 TRMT112P2-201ENST00000512910 132 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 RNU6-917P-201ENST00000516294 104 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.02□□□□□ -2.41
VPS25Q9BRG1 MIR3945-201ENST00000581853 98 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 AC025627.3-201ENST00000582078 182 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 AC004987.4-201ENST00000603383 338 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 AC022217.4-201ENST00000604389 163 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.02□□□□□ -2.41
VPS25Q9BRG1 OR4G1P-203ENST00000641984 1631 ntBASIC0.02□□□□□ -2.41
VPS25Q9BRG1 snoU2-30.2-201ENST00000362805 70 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 SNORD44.1-201ENST00000363202 61 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 RNU5E-7P-201ENST00000365290 117 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 RNU4-48P-201ENST00000365559 182 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 RNU6-43P-201ENST00000384302 107 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 RNU6-16P-201ENST00000384385 107 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 SNORA16.2-201ENST00000390991 127 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 RNU6-321P-201ENST00000410912 106 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS25Q9BRG1 HSFY7P-201ENST00000432672 318 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS25Q9BRG1 HSFY8P-201ENST00000437934 318 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS25Q9BRG1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS25Q9BRG1 RNU6-1069P-201ENST00000516612 133 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 RNA5SP102-201ENST00000516865 106 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC087854.1-201ENST00000519706 414 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AP002001.1-203ENST00000534002 267 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC008752.3-201ENST00000588113 712 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC078795.3-201ENST00000602913 472 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AL356157.2-201ENST00000605122 111 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC092574.1-201ENST00000609771 420 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC097478.2-201ENST00000610572 514 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS25Q9BRG1 PCGEM1.1-201ENST00000613431 131 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AL138726.1-201ENST00000614873 333 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AP000484.1-201ENST00000620067 1252 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC103706.2-201ENST00000638080 240 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 AC006927.4-201ENST00000639187 543 ntBASIC0.01□□□□□ -2.41
VPS25Q9BRG1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
VPS25Q9BRG1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
VPS25Q9BRG1 RNU1-76P-201ENST00000362903 159 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 RNA5SP264-201ENST00000363115 107 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 Y_RNA.287-201ENST00000364853 94 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 SNORA72.2-201ENST00000365028 127 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
VPS25Q9BRG1 RNU6-342P-201ENST00000384521 104 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 SNORA40.2-201ENST00000390847 128 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 RNU4-22P-201ENST00000411058 166 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 AL355994.1-201ENST00000424379 260 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 AC010975.2-201ENST00000427781 588 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 USP9YP28-201ENST00000435142 589 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 AC005002.2-201ENST00000438228 269 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0□□□□□ -2.41
VPS25Q9BRG1 ZNF736P5Y-201ENST00000451173 805 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0□□□□□ -2.41
VPS25Q9BRG1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0□□□□□ -2.41
VPS25Q9BRG1 AC007547.1-201ENST00000462177 490 ntBASIC0□□□□□ -2.41
VPS25Q9BRG1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms