Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LARP1BP3-201ENST00000437229 869 ntBASIC-0.19□□□□□ -2.44
ABCA3Q99758 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.19□□□□□ -2.44
ABCA3Q99758 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.19□□□□□ -2.44
ABCA3Q99758 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
ABCA3Q99758 MIRLET7D-201ENST00000362263 87 ntBASIC-0.2□□□□□ -2.44
ABCA3Q99758 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
ABCA3Q99758 RNU6V-201ENST00000384105 107 ntBASIC-0.2□□□□□ -2.44
ABCA3Q99758 RAP1BP3-201ENST00000407180 549 ntBASIC-0.2□□□□□ -2.44
ABCA3Q99758 DAP3P1-201ENST00000441522 278 ntBASIC-0.2□□□□□ -2.44
ABCA3Q99758 RNU7-21P-201ENST00000459430 62 ntBASIC-0.2□□□□□ -2.44
ABCA3Q99758 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.2□□□□□ -2.44
ABCA3Q99758 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.2□□□□□ -2.44
ABCA3Q99758 AC009902.1-201ENST00000519351 183 ntBASIC-0.2□□□□□ -2.44
ABCA3Q99758 MTND5P16-201ENST00000460269 1703 ntBASIC-0.2□□□□□ -2.44
ABCA3Q99758 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
ABCA3Q99758 SNORD116-13-201ENST00000384408 92 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.21□□□□□ -2.44
ABCA3Q99758 snoU13.25-201ENST00000458945 104 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 RN7SKP12-201ENST00000516275 143 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 SNORD60.2-201ENST00000516883 86 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AC011195.1-201ENST00000578177 177 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.21□□□□□ -2.44
ABCA3Q99758 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.21□□□□□ -2.44
ABCA3Q99758 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 VPS26BP1-201ENST00000417155 755 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AL139421.1-201ENST00000423010 169 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.21□□□□□ -2.44
ABCA3Q99758 RPL39P39-201ENST00000455840 151 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AC022364.2-201ENST00000457963 554 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 HMGB1P28-201ENST00000507778 552 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 MTND1P22-201ENST00000510572 951 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AC109810.1-201ENST00000534066 224 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 MIR3136-201ENST00000583498 78 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AL391001.1-201ENST00000602747 715 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 AC063943.3-201ENST00000615562 356 ntBASIC-0.21□□□□□ -2.44
ABCA3Q99758 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 SNORD49B-201ENST00000365172 72 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 RNU6-166P-201ENST00000384371 107 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 RNA5SP222-201ENST00000411039 105 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 USP9YP14-201ENST00000430663 563 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.22□□□□□ -2.44
ABCA3Q99758 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
ABCA3Q99758 AC090888.2-201ENST00000559765 1144 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 AC023824.3-201ENST00000569003 562 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 AC116165.2-201ENST00000616705 206 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 AC084824.4-201ENST00000620106 731 ntBASIC-0.22□□□□□ -2.44
ABCA3Q99758 SNORA27.3-201ENST00000364937 134 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 SUGT1P1-201ENST00000379514 476 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 RNY3P5-201ENST00000384127 102 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 AL355796.1-201ENST00000406706 323 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.23□□□□□ -2.45
ABCA3Q99758 MTCO2P1-201ENST00000424648 477 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 HMGB1P30-201ENST00000492455 606 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 HMGN1P12-201ENST00000499125 195 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 AC116347.2-201ENST00000514912 523 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.23□□□□□ -2.45
ABCA3Q99758 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.23□□□□□ -2.45
ABCA3Q99758 AL390237.1-201ENST00000404226 1415 ntBASIC-0.23□□□□□ -2.45
ABCA3Q99758 RNU6-216P-201ENST00000363282 104 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 RNY3-201ENST00000365484 102 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 RNU4-48P-201ENST00000365559 182 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 SNX3P1X-201ENST00000414887 175 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 DPRXP1-201ENST00000426312 460 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC022523.2-201ENST00000561045 150 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 BNIP3P30-201ENST00000601184 574 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC078795.2-201ENST00000602835 1252 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 RNU4-5P-201ENST00000607255 135 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC008759.3-201ENST00000613300 508 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC100810.6-201ENST00000638068 285 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 RNA5SP451-201ENST00000410588 110 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC068533.2-201ENST00000411872 306 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC092427.1-201ENST00000439177 601 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.24□□□□□ -2.45
ABCA3Q99758 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.24□□□□□ -2.45
ABCA3Q99758 RNY1P9-201ENST00000532431 109 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 MIR4290-201ENST00000583807 95 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC097065.2-201ENST00000608159 533 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC136475.10-201ENST00000620253 385 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 AC092656.1-203ENST00000624134 423 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 MIR1295B-201ENST00000636144 60 ntBASIC-0.24□□□□□ -2.45
ABCA3Q99758 MTND4P5-201ENST00000435821 1374 ntBASIC-0.25□□□□□ -2.45
ABCA3Q99758 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
ABCA3Q99758 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.25□□□□□ -2.45
ABCA3Q99758 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.25□□□□□ -2.45
ABCA3Q99758 TPMTP2-201ENST00000414372 726 ntBASIC-0.25□□□□□ -2.45
ABCA3Q99758 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.25□□□□□ -2.45
ABCA3Q99758 ELOCP30-201ENST00000447108 299 ntBASIC-0.25□□□□□ -2.45
ABCA3Q99758 NFU1P2-201ENST00000448700 469 ntBASIC-0.25□□□□□ -2.45
ABCA3Q99758 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.25□□□□□ -2.45
ABCA3Q99758 AC114981.1-201ENST00000503897 678 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms