Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 AL356274.2-201ENST00000624379 3752 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 FAM35BP-202ENST00000497389 3337 ntBASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.04□□□□□ -1.76
SYNGAP1Q96PV0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 RBBP8P1-201ENST00000449447 1844 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AC006504.1-201ENST00000562493 3666 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 Y_RNA.238-201ENST00000364441 102 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 Y_RNA.262-201ENST00000364641 102 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-217P-201ENST00000384164 104 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 Y_RNA.498-201ENST00000384460 102 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 SNORD17-201ENST00000390930 237 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AL138878.1-201ENST00000405131 347 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 RPL23AP95-201ENST00000426806 265 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 NDUFB4P6-201ENST00000436819 366 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AC005042.3-201ENST00000453230 174 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 RNU6-625P-201ENST00000459412 107 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AP005660.1-201ENST00000522972 293 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 MIR4308-201ENST00000580634 81 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 MIR3145-201ENST00000580727 82 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AL357075.2-201ENST00000614906 189 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 AC092593.1-201ENST00000515413 1815 ntBASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SYNGAP1Q96PV0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 MIR549A-201ENST00000385268 96 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 U3.19-201ENST00000390893 196 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 RNA5SP129-201ENST00000410276 118 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 RN7SKP111-201ENST00000410349 271 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-394P-201ENST00000410735 107 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 AC244670.1-201ENST00000436879 112 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 U3.44-201ENST00000458938 192 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-1282P-201ENST00000516735 96 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 AC016256.1-201ENST00000547971 354 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 MIR6134-201ENST00000617606 109 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 AL365265.1-201ENST00000621045 234 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 AC048347.1-201ENST00000624621 427 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 ADAM3A-203ENST00000461344 2157 ntBASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SYNGAP1Q96PV0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 RNU4-80P-201ENST00000363200 141 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 Y_RNA.136-201ENST00000363444 102 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-137P-201ENST00000363680 108 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-1141P-201ENST00000364520 107 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 SNORD113-1-201ENST00000365321 69 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 SNORD116-18-201ENST00000383961 92 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 RHEBP3-201ENST00000411920 351 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 AC017083.1-201ENST00000428093 483 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 AC093663.1-201ENST00000497190 394 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 RNU6-579P-201ENST00000516879 102 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 CR383656.8-201ENST00000549046 145 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 AL451007.1-201ENST00000595491 289 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 U2.21-201ENST00000637295 81 ntBASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SYNGAP1Q96PV0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4□□□□□ -1.77
SYNGAP1Q96PV0 MTND5P35-201ENST00000557537 1720 ntBASIC4□□□□□ -1.77
SYNGAP1Q96PV0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms