Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-545P-201ENST00000362681 104 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 Y_RNA.338-201ENST00000365320 114 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 RNU6-43P-201ENST00000384302 107 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 RNU6-378P-201ENST00000384324 107 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 RNU6-692P-201ENST00000384496 107 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 RNU6-1235P-201ENST00000384559 107 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 RNU6-1031P-201ENST00000384773 107 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AL355796.1-201ENST00000406706 323 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 MTND3P20-201ENST00000407663 186 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 SNORD99-201ENST00000408612 74 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC114491.1-201ENST00000416095 246 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AL590135.1-201ENST00000422215 156 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC019205.3-201ENST00000424573 156 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 TIMM9P3-201ENST00000428659 274 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC016700.2-201ENST00000446011 156 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC006026.2-201ENST00000457376 180 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 RNU6-498P-201ENST00000459468 107 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC015911.1-201ENST00000495111 156 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC010587.2-201ENST00000511727 448 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 MTCO3P27-201ENST00000514397 196 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC026616.1-201ENST00000523157 525 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC123904.2-201ENST00000548059 300 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.2□□□□□ -2.38
AP1S3Q96PC3 MIR4781-201ENST00000585250 76 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AL158032.1-201ENST00000605401 106 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.2□□□□□ -2.38
AP1S3Q96PC3 AL603839.4-201ENST00000624658 1005 ntBASIC0.2□□□□□ -2.38
AP1S3Q96PC3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
AP1S3Q96PC3 MTND5P16-201ENST00000460269 1703 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 RNU6-462P-201ENST00000362659 105 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 RNU6-527P-201ENST00000363425 104 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 RNY1P8-201ENST00000383970 114 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 EEF1A1P40-201ENST00000412883 573 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC019070.1-201ENST00000415008 1024 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC098934.3-201ENST00000430450 190 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 MTND4P15-201ENST00000437913 1033 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 RPEP5-201ENST00000441137 268 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 DAP3P1-201ENST00000441522 278 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 MTCYBP1-201ENST00000454315 1119 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 snoU13.25-201ENST00000458945 104 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 SNRPGP7-201ENST00000469016 106 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC079395.1-201ENST00000510981 262 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 FABP5P5-201ENST00000515537 406 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 RNU6-947P-201ENST00000516264 106 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 RN7SKP12-201ENST00000516275 143 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 RNU5F-4P-201ENST00000516581 114 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AP001893.2-201ENST00000526949 202 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AL512605.2-201ENST00000592972 256 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AL606834.3-201ENST00000602615 496 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC136443.5-201ENST00000603741 370 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 Z98751.3-201ENST00000604447 521 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC024060.1-201ENST00000607052 494 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC243829.6-201ENST00000612652 106 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC243829.3-201ENST00000622177 108 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 MIR6516-201ENST00000630554 81 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 U4.7-201ENST00000638126 106 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 AC006927.4-201ENST00000639187 543 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 BX322639.1-202ENST00000423987 2213 ntBASIC0.19□□□□□ -2.38
AP1S3Q96PC3 Y_RNA.46-201ENST00000362695 102 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 RNU1-76P-201ENST00000362903 159 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 RNU6-433P-201ENST00000363216 104 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 RNU6-105P-201ENST00000363909 104 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 RNU6-560P-201ENST00000364007 108 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC006366.1-201ENST00000422002 759 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC010975.2-201ENST00000427781 588 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.18□□□□□ -2.38
AP1S3Q96PC3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.18□□□□□ -2.38
AP1S3Q96PC3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC067942.3-201ENST00000512025 362 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC109445.1-201ENST00000512356 383 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC107934.1-201ENST00000522215 217 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.18□□□□□ -2.38
AP1S3Q96PC3 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC012557.2-201ENST00000605919 418 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC091965.4-201ENST00000607691 587 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AC068787.1-201ENST00000623908 691 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 AL450472.1-202ENST00000637286 180 ntBASIC0.18□□□□□ -2.38
AP1S3Q96PC3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
AP1S3Q96PC3 RNY4P16-201ENST00000364768 94 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 RNU5E-7P-201ENST00000365290 117 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 RNA5SP467-201ENST00000391274 118 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
AP1S3Q96PC3 ISCA1P6-201ENST00000427740 390 ntBASIC0.17□□□□□ -2.38
AP1S3Q96PC3 HSFY7P-201ENST00000432672 318 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms