Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RNA5SP503-201ENST00000517047 117 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 BNIP3P39-201ENST00000601077 554 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 AC073413.2-201ENST00000604332 360 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 PCGEM1.1-201ENST00000613431 131 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 AC083806.3-201ENST00000614016 455 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 AL121890.5-201ENST00000620848 304 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 AC068787.1-201ENST00000623908 691 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 SEPT14P19-203ENST00000633205 211 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 AL159152.1-201ENST00000635019 2587 ntBASIC1.22□□□□□ -2.21
C9orf72Q96LT7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
C9orf72Q96LT7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.21
C9orf72Q96LT7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
C9orf72Q96LT7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
C9orf72Q96LT7 SNORD32A-201ENST00000364805 84 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 RNU6-74P-201ENST00000384235 107 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 RNU6-360P-201ENST00000390944 104 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 RN7SKP61-201ENST00000410642 295 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AL596276.1-201ENST00000434465 418 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AC244505.5-201ENST00000443639 207 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AL133217.1-201ENST00000450980 425 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 RPS29P15-201ENST00000458329 171 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 snoU13.30-201ENST00000458951 104 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 RNU7-182P-201ENST00000459009 62 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AC021231.3-201ENST00000558497 370 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AC078795.3-201ENST00000602913 472 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AC069114.2-201ENST00000604699 304 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 Z84480.1-201ENST00000605131 311 ntBASIC1.21□□□□□ -2.22
C9orf72Q96LT7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.21□□□□□ -2.22
C9orf72Q96LT7 RNU6-862P-201ENST00000362804 105 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 RNU6-1029P-201ENST00000384109 107 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 RNU6-393P-201ENST00000384475 107 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 MIR1-2-201ENST00000384961 85 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 MIR548B-201ENST00000385247 97 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 MIR1276-201ENST00000408707 83 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 HIGD1AP15-201ENST00000416198 280 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 Z99497.1-201ENST00000421282 135 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 C8orf59P1-201ENST00000429930 303 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC099677.2-201ENST00000436385 175 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC013470.1-201ENST00000453438 462 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AK3P2-201ENST00000507976 429 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 RNA5SP437-201ENST00000517249 129 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC019176.1-201ENST00000518519 225 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC008945.2-201ENST00000606056 604 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC092354.1-201ENST00000606057 376 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 MIR98-201ENST00000606724 119 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC136475.10-201ENST00000620253 385 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC022418.1-201ENST00000624118 445 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC095038.3-201ENST00000634439 195 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC010615.1-201ENST00000594254 1764 ntBASIC1.2□□□□□ -2.22
C9orf72Q96LT7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
C9orf72Q96LT7 AC092268.1-201ENST00000342691 405 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 MIR302D-201ENST00000362275 68 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 RNU6-552P-201ENST00000362869 119 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 SNORD31B-201ENST00000364977 69 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 RNU6-378P-201ENST00000384324 107 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 RPS29P13-201ENST00000402041 169 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 RNU4-46P-201ENST00000410818 138 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 RPL31P35-201ENST00000431058 377 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 FTH1P12-201ENST00000432137 551 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 PRPS1P1-201ENST00000445305 876 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.19□□□□□ -2.22
C9orf72Q96LT7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.19□□□□□ -2.22
C9orf72Q96LT7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.19□□□□□ -2.22
C9orf72Q96LT7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.19□□□□□ -2.22
C9orf72Q96LT7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.19□□□□□ -2.22
C9orf72Q96LT7 SNORD60.2-201ENST00000516883 86 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 EIF4A1P12-201ENST00000551910 141 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 AC103996.1-201ENST00000555468 102 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.19□□□□□ -2.22
C9orf72Q96LT7 SNORA59B-202ENST00000578183 701 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 AC090616.2-202ENST00000584248 222 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 VN1R107P-201ENST00000601784 209 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 AL356157.2-201ENST00000605122 111 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 AC027449.1-201ENST00000608890 407 ntBASIC1.19□□□□□ -2.22
C9orf72Q96LT7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
C9orf72Q96LT7 RNU6-827P-201ENST00000365553 106 ntBASIC1.18□□□□□ -2.22
C9orf72Q96LT7 Y_RNA.480-201ENST00000384364 102 ntBASIC1.18□□□□□ -2.22
C9orf72Q96LT7 RNU6-1026P-201ENST00000384465 108 ntBASIC1.18□□□□□ -2.22
C9orf72Q96LT7 Y_RNA.504-201ENST00000384481 104 ntBASIC1.18□□□□□ -2.22
C9orf72Q96LT7 SNORD70.1-201ENST00000391007 85 ntBASIC1.18□□□□□ -2.22
C9orf72Q96LT7 AL117339.3-201ENST00000418733 162 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms