Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC008555.8-201ENST00000623602 2168 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 RNU6-428P-201ENST00000362942 107 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 Y_RNA.356-201ENST00000365475 113 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AL078595.1-201ENST00000404458 226 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 RNU4-14P-201ENST00000410858 122 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 RNU2-32P-201ENST00000411193 191 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AC074085.1-201ENST00000413598 418 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 GPM6BP3-201ENST00000442797 145 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AL031659.1-201ENST00000447075 539 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 MTND3P22-201ENST00000510932 243 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 RNU6-377P-201ENST00000515965 102 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 RNU6-667P-201ENST00000517186 102 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AC104576.1-201ENST00000524225 88 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AC115990.1-201ENST00000526957 301 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AC005668.1-201ENST00000571142 476 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AL359697.1-201ENST00000624879 587 ntBASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PDLIM5Q96HC4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 RNU6-797P-201ENST00000363101 109 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 RNU4-73P-201ENST00000363164 141 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 RNU6-827P-201ENST00000365553 106 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 Y_RNA.509-201ENST00000384506 99 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 MIR17-201ENST00000385012 84 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 AL445529.1-201ENST00000398713 389 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 RPS29P13-201ENST00000402041 169 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 MIR548F5-201ENST00000408421 86 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 NCOR1P3-201ENST00000420479 303 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 SNAP23P1-201ENST00000433229 246 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 RNU7-187P-201ENST00000458985 68 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 MTND4P17-201ENST00000470444 350 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 RPL30P1-201ENST00000488676 339 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 AC018868.1-201ENST00000491307 315 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 AC096745.1-201ENST00000509945 370 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 SNRPGP18-201ENST00000553000 214 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 AC103996.1-201ENST00000555468 102 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 MIR4790-201ENST00000577799 79 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 CPDP1-201ENST00000579660 283 ntBASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
PDLIM5Q96HC4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AL365361.1-201ENST00000566942 3481 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 RNA5SP289-201ENST00000362332 137 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 Y_RNA.61-201ENST00000362835 102 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 RNU6-336P-201ENST00000364891 107 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 RNU6-611P-201ENST00000384276 104 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 RNU6-1222P-201ENST00000384615 107 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 MIR221-201ENST00000385135 110 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 MT-TD-201ENST00000387419 68 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AL030996.1-201ENST00000411430 235 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AC130509.1-201ENST00000464158 433 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 HMGB1P35-201ENST00000503360 598 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 TRAV32-201ENST00000553993 340 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 MIR4672-201ENST00000583126 81 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AC113139.1-201ENST00000605049 239 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 AC016727.1-205ENST00000605437 569 ntBASIC2.17□□□□□ -2.06
PDLIM5Q96HC4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 Y_RNA.151-201ENST00000363566 112 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 U3.13-201ENST00000364804 214 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 MIR544A-201ENST00000384855 91 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 MIR29C-201ENST00000385231 88 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AL031274.1-201ENST00000450334 232 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 RNU6-1037P-201ENST00000459571 107 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 RPS27P21-201ENST00000486977 252 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AC008549.1-201ENST00000512900 643 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AC022616.8-201ENST00000533569 253 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AC093027.1-201ENST00000546698 429 ntBASIC2.16□□□□□ -2.06
PDLIM5Q96HC4 AL355375.2-201ENST00000574825 175 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms