Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 snoU13.9-201ENST00000458927 103 ntBASIC1.75□□□□□ -2.13
CCDC47Q96A33 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC47Q96A33 MTCO2P4-201ENST00000517968 247 ntBASIC1.75□□□□□ -2.13
CCDC47Q96A33 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC47Q96A33 BX248123.2-201ENST00000606318 124 ntBASIC1.75□□□□□ -2.13
CCDC47Q96A33 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC47Q96A33 Y_RNA.159-201ENST00000363674 87 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 SNORD31B-201ENST00000364977 69 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 RNU7-63P-201ENST00000459054 62 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 AC007547.1-201ENST00000462177 490 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 AC116337.1-201ENST00000509680 687 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 Y_RNA.675-201ENST00000516389 149 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 AP000873.5-201ENST00000533906 236 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC47Q96A33 AC090517.1-201ENST00000569307 266 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 VN1R80P-201ENST00000597126 338 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 AL161722.3-201ENST00000605789 2983 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 SNORA43.4-201ENST00000629559 138 ntBASIC1.74□□□□□ -2.13
CCDC47Q96A33 RNU6-1026P-201ENST00000384465 108 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 RNU6-296P-201ENST00000384608 107 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 MIR517C-201ENST00000385103 95 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 RNU1-78P-201ENST00000391248 165 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 AP000275.1-201ENST00000411943 390 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC47Q96A33 AL358453.1-201ENST00000422522 250 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 VN1R108P-201ENST00000431580 830 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 MTCO1P44-201ENST00000441935 243 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC47Q96A33 HMGN1P13-201ENST00000505795 138 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC47Q96A33 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC47Q96A33 HMGB1P33-201ENST00000563485 527 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 AC073114.1-201ENST00000612027 490 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 AC083806.3-201ENST00000614016 455 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC47Q96A33 AC068205.3-201ENST00000636385 468 ntBASIC1.73□□□□□ -2.13
CCDC47Q96A33 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC47Q96A33 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC47Q96A33 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC47Q96A33 RNU6-414P-201ENST00000363705 104 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 RNU6-348P-201ENST00000384386 107 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 AC068050.1-201ENST00000394891 380 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 RN7SKP51-201ENST00000410781 304 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 AC007677.1-201ENST00000445757 515 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 AC016925.1-201ENST00000458303 298 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 RPS29P23-201ENST00000458635 123 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 RNU7-180P-201ENST00000459240 63 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 snoU13.15-201ENST00000459407 104 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.72□□□□□ -2.13
CCDC47Q96A33 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC47Q96A33 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC47Q96A33 SNORD53B-201ENST00000577887 78 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 MIR3683-201ENST00000580847 82 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 NIFKP6-201ENST00000598115 845 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 AC009994.1-201ENST00000606889 253 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC47Q96A33 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC47Q96A33 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC47Q96A33 AL159152.1-201ENST00000635019 2587 ntBASIC1.72□□□□□ -2.13
CCDC47Q96A33 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC47Q96A33 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC47Q96A33 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CCDC47Q96A33 RNU6-996P-201ENST00000365438 107 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 SNORD73A-201ENST00000386062 65 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 RNU6-1106P-201ENST00000390845 107 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 MIR1267-201ENST00000408723 78 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC47Q96A33 AC012306.1-201ENST00000423267 114 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 AL513185.2-201ENST00000425543 193 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 UBE2V1P8-201ENST00000437166 265 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 AL163973.1-201ENST00000484753 577 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 RPS23P5-201ENST00000495419 428 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC47Q96A33 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CCDC47Q96A33 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.71□□□□□ -2.14
CCDC47Q96A33 MIR4528-201ENST00000577763 90 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 AC064807.4-201ENST00000607201 407 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 AC005520.5-201ENST00000613926 164 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 uc_338.34-201ENST00000617467 174 ntBASIC1.71□□□□□ -2.14
CCDC47Q96A33 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC47Q96A33 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC47Q96A33 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC47Q96A33 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC47Q96A33 RNU1-76P-201ENST00000362903 159 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 AL049545.1-201ENST00000401856 572 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 RNU6-955P-201ENST00000410497 104 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 AC007098.1-201ENST00000420122 367 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 OOSP1P1-201ENST00000423265 274 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 MTCO2P3-201ENST00000442543 421 ntBASIC1.7□□□□□ -2.14
CCDC47Q96A33 USP9YP29-201ENST00000445112 563 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms