Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MTND5P15-201ENST00000434246 349 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.72□□□□□ -1.81
BRF1Q92994 SUMO1P3-201ENST00000439961 304 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 AL161651.1-201ENST00000440882 223 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.72□□□□□ -1.81
BRF1Q92994 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 SNORA81.3-201ENST00000517283 198 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 MIR5695-201ENST00000579717 85 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.72□□□□□ -1.81
BRF1Q92994 MIR8058-201ENST00000615737 89 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 U2.14-201ENST00000615943 113 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 MIR6075-201ENST00000620782 95 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.72□□□□□ -1.81
BRF1Q92994 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.72□□□□□ -1.81
BRF1Q92994 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.72□□□□□ -1.81
BRF1Q92994 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.72□□□□□ -1.81
BRF1Q92994 AC004944.1-201ENST00000517807 3059 ntBASIC3.72□□□□□ -1.81
BRF1Q92994 AC002543.1-201ENST00000299783 1954 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BRF1Q92994 MIR148B-201ENST00000362252 99 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 Y_RNA.54-201ENST00000362766 105 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 Y_RNA.65-201ENST00000362846 100 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 RNA5SP267-201ENST00000364893 126 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BRF1Q92994 RNU6-1062P-201ENST00000383908 107 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 MIR7-3-201ENST00000384898 110 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 RNA5SP171-201ENST00000391071 115 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AC023141.4-201ENST00000412031 328 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 CYCSP48-201ENST00000417124 323 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AC012306.1-201ENST00000423267 114 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.71□□□□□ -1.82
BRF1Q92994 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.71□□□□□ -1.82
BRF1Q92994 AL445305.1-201ENST00000432577 575 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.71□□□□□ -1.82
BRF1Q92994 PRSS3P4-201ENST00000453323 162 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AP000705.1-201ENST00000454567 350 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AC073901.1-201ENST00000462471 408 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 RPS27P29-201ENST00000463110 252 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AP002884.2-201ENST00000471647 395 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 SCARNA24.2-201ENST00000516968 130 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AC115990.1-201ENST00000526957 301 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.71□□□□□ -1.82
BRF1Q92994 RRN3P3-201ENST00000549207 578 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.71□□□□□ -1.82
BRF1Q92994 UBL5P4-201ENST00000562584 236 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 RNU6-91P-201ENST00000607774 107 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 MIR7112-201ENST00000616126 65 ntBASIC3.71□□□□□ -1.82
BRF1Q92994 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.71□□□□□ -1.82
BRF1Q92994 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BRF1Q92994 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRF1Q92994 Y_RNA.29-201ENST00000362570 113 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 RNU6-280P-201ENST00000364145 104 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 Y_RNA.555-201ENST00000384673 110 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 MIR487A-201ENST00000385009 80 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 AL033519.2-201ENST00000403958 392 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 RNU6-1001P-201ENST00000411265 100 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.7□□□□□ -1.82
BRF1Q92994 RPL32P35-201ENST00000415214 394 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 SUMO1P2-201ENST00000452524 304 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 AC010099.1-201ENST00000455434 375 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 RNU6-567P-201ENST00000516746 107 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.7□□□□□ -1.82
BRF1Q92994 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.7□□□□□ -1.82
BRF1Q92994 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
BRF1Q92994 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF1Q92994 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BRF1Q92994 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
BRF1Q92994 RNU5F-3P-201ENST00000363767 117 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 Y_RNA.230-201ENST00000364348 109 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 Y_RNA.269-201ENST00000364685 89 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 RNU6-326P-201ENST00000365480 107 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 RNU6-748P-201ENST00000384648 107 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 AL390729.2-201ENST00000416137 156 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 PIGPP3-201ENST00000425307 415 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF1Q92994 RPS12P18-201ENST00000442381 270 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 RN7SL863P-201ENST00000462370 296 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 AC007215.1-201ENST00000464893 276 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 RPL30P12-201ENST00000474666 353 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF1Q92994 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF1Q92994 MIR4643-201ENST00000577473 78 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF1Q92994 AL078605.1-201ENST00000603529 500 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 AC091152.3-201ENST00000604227 325 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 FTX_2.1-201ENST00000618816 94 ntBASIC3.69□□□□□ -1.82
BRF1Q92994 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF1Q92994 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.69□□□□□ -1.82
BRF1Q92994 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BRF1Q92994 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.69□□□□□ -1.82
BRF1Q92994 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRF1Q92994 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
BRF1Q92994 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
BRF1Q92994 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
BRF1Q92994 Y_RNA.200-201ENST00000364018 102 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 Y_RNA.274-201ENST00000364714 101 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 Y_RNA.297-201ENST00000364950 91 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 RNU6-198P-201ENST00000384258 104 ntBASIC3.68□□□□□ -1.82
BRF1Q92994 Y_RNA.570-201ENST00000384750 101 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms