Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNA5SP481-201ENST00000516814 122 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 RNU2-46P-201ENST00000517038 113 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 AP003461.1-201ENST00000528866 78 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 ELOCP32-201ENST00000548625 324 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 MIR3923-201ENST00000579521 83 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 AP003465.2-201ENST00000602571 373 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 RPL17P51-201ENST00000605218 238 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 RNU6-6P-201ENST00000606623 107 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 AC004492.1-201ENST00000607036 742 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.04□□□□□ -2.24
CLHC1Q8NHS4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AC092268.1-201ENST00000342691 405 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 RNU4-56P-201ENST00000364700 142 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 RNU6-715P-201ENST00000365204 103 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 RNU6-438P-201ENST00000365561 103 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 SNORA29-201ENST00000384183 140 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 RNU6-925P-201ENST00000384629 104 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 MIR194-1-201ENST00000384892 85 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AP000275.1-201ENST00000411943 390 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 SNAP23P1-201ENST00000433229 246 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AC104850.1-201ENST00000435940 476 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 Z73417.1-201ENST00000447373 778 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 EPS15P1-201ENST00000448836 336 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AC132479.1-201ENST00000449160 144 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 SNORD11.1-201ENST00000459482 85 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 HMGN2P9-201ENST00000476875 229 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 MRPS36P3-201ENST00000519284 130 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AC109446.1-201ENST00000566172 220 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AC098848.2-201ENST00000588023 330 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AC012676.2-201ENST00000619258 186 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 AC091895.1-201ENST00000624494 256 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 MTND4P14-201ENST00000435799 1354 ntBASIC1.03□□□□□ -2.24
CLHC1Q8NHS4 RNU1-76P-201ENST00000362903 159 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 RNU1-22P-201ENST00000363334 158 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 U3.9-201ENST00000363823 204 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 Y_RNA.367-201ENST00000365544 101 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 MIR548B-201ENST00000385247 97 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 HIGD1AP15-201ENST00000416198 280 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 MTND3P3-201ENST00000505004 126 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 MTCO3P28-201ENST00000513351 515 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 BNIP3P8-201ENST00000597863 560 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 NIFKP6-201ENST00000598115 845 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 AC005520.5-201ENST00000613926 164 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 AL450472.1-202ENST00000637286 180 ntBASIC1.02□□□□□ -2.25
CLHC1Q8NHS4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 RNU6-428P-201ENST00000362942 107 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 RNU6-968P-201ENST00000384076 107 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 Y_RNA.598-201ENST00000410480 95 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 MTATP6P19-201ENST00000413797 659 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AL117339.3-201ENST00000418733 162 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AC073614.1-201ENST00000438690 650 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 GAPDHP17-201ENST00000449858 1001 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AC007395.1-201ENST00000451333 677 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 MTCO2P6-201ENST00000463134 685 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AC114982.1-201ENST00000469402 321 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 FABP5P5-201ENST00000515537 406 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 SNORD27.1-201ENST00000516319 72 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 Vault.3-201ENST00000516676 95 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 CENPUP1-201ENST00000526649 1202 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 MIR4775-201ENST00000581168 75 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 Z99289.3-201ENST00000605586 594 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AC005014.3-201ENST00000605985 190 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 AL159152.1-201ENST00000635019 2587 ntBASIC1.01□□□□□ -2.25
CLHC1Q8NHS4 RNU6-1303P-201ENST00000364841 107 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 RNU6-74P-201ENST00000384235 107 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 MIR499A-201ENST00000384903 122 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 AL117342.1-201ENST00000404861 406 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 ARL5AP1-201ENST00000418991 388 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 SNX2P2-201ENST00000424553 323 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 AC079781.2-201ENST00000446424 169 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 MTND1P18-201ENST00000448191 573 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 MTCYBP1-201ENST00000454315 1119 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 SNRPGP9-201ENST00000456025 225 ntBASIC1□□□□□ -2.25
CLHC1Q8NHS4 AC010531.2-201ENST00000465012 153 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms