Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RNA5SP481-201ENST00000516814 122 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 AC068587.5-201ENST00000528506 175 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 CYP3A52P-201ENST00000563326 91 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 AC015688.6-201ENST00000577737 104 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 MIR3923-201ENST00000579521 83 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 MTATP6P3-201ENST00000581686 676 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 AP003465.2-201ENST00000602571 373 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 AL121992.2-201ENST00000606262 256 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.8□□□□□ -2.28
CLDND2Q8NHS1 RNU6-1019P-201ENST00000364424 107 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 RNU6-1065P-201ENST00000384513 106 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AL008987.1-201ENST00000415528 237 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 ARL5AP1-201ENST00000418991 388 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 RNU7-14P-201ENST00000459331 62 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 HMGN2P9-201ENST00000476875 229 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 RNU7-40P-201ENST00000516397 64 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 RNU5F-4P-201ENST00000516581 114 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC022616.3-201ENST00000523940 148 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 CBX3P8-201ENST00000532412 525 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC016957.1-201ENST00000534895 309 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 ZNF321P-202ENST00000550843 495 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 HMGN1P30-201ENST00000589286 268 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 BNIP3P16-201ENST00000589779 534 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 MIR3976-201ENST00000606807 139 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC138749.5-201ENST00000611461 208 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC116165.2-201ENST00000616705 206 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AC009878.1-201ENST00000621819 340 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 AP000720.1-201ENST00000625091 483 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 MTND4P14-201ENST00000435799 1354 ntBASIC0.79□□□□□ -2.28
CLDND2Q8NHS1 MIR373-201ENST00000362273 69 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 U3.9-201ENST00000363823 204 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 RNU1-96P-201ENST00000364163 162 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 SNORD31B-201ENST00000364977 69 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 SNORD115-7-201ENST00000365306 82 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AC104136.1-201ENST00000512969 394 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 RNU6-1098P-201ENST00000516772 96 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 MTCO2P2-201ENST00000591258 225 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AC107304.1-201ENST00000604229 296 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 MIR6857-201ENST00000613267 93 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AC022709.1-201ENST00000615967 87 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AC027807.2-201ENST00000616099 408 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 AC010608.3-201ENST00000625048 527 ntBASIC0.78□□□□□ -2.28
CLDND2Q8NHS1 U3.4-201ENST00000363352 213 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 RNU6-336P-201ENST00000364891 107 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 SNORA20.2-201ENST00000383922 131 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 RNU6-331P-201ENST00000384724 107 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 RNA5SP201-201ENST00000410316 124 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 RNU2-8P-201ENST00000410727 190 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 MTCO1P21-201ENST00000416634 589 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AC078809.1-201ENST00000427601 140 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 MTCO3P29-201ENST00000432119 779 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AL512286.1-201ENST00000439244 400 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 DYNLT3P2-201ENST00000442517 295 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AL606662.1-201ENST00000445763 553 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 RPS4XP11-201ENST00000446897 772 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AC132479.1-201ENST00000449160 144 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 SNRPFP3-201ENST00000457792 225 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AL163195.1-201ENST00000496941 348 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 Y_RNA.672-201ENST00000516289 104 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 SCARNA24.1-201ENST00000516465 137 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 RNU6-1220P-201ENST00000517126 108 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AC109479.2-201ENST00000517842 174 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 HSPE1P4-201ENST00000550617 308 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AC021231.3-201ENST00000558497 370 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 SNORA59B-202ENST00000578183 701 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AP005136.1-201ENST00000579765 429 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 AL451064.1-201ENST00000607718 471 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 PCGEM1.1-201ENST00000613431 131 ntBASIC0.77□□□□□ -2.29
CLDND2Q8NHS1 MIR8065-201ENST00000620577 100 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms