Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
RTL3Q8N8U3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RTL3Q8N8U3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-37P-201ENST00000362692 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-11P-201ENST00000364234 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-867P-201ENST00000364956 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-25P-201ENST00000383873 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-1-201ENST00000383898 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 SNORA32.2-201ENST00000384049 122 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-48P-201ENST00000384161 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-36P-201ENST00000384172 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-4P-201ENST00000384205 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-5P-201ENST00000384238 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-301P-201ENST00000384277 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-3P-201ENST00000384314 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-16P-201ENST00000384385 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-15P-201ENST00000384534 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-2-201ENST00000384627 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-29P-201ENST00000384637 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-9-201ENST00000384776 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-33P-201ENST00000384793 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 U3.40-201ENST00000408706 208 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 AL590556.1-201ENST00000423231 483 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 Y_RNA.691-201ENST00000516611 103 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-323P-201ENST00000521915 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 MIR4298-201ENST00000584380 73 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-85P-201ENST00000605989 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 RNU6-6P-201ENST00000606623 107 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.14□□□□□ -2.07
RTL3Q8N8U3 AC093913.1-201ENST00000614178 329 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 AL133216.2-202ENST00000634512 349 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
RTL3Q8N8U3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 U8.2-201ENST00000363156 134 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 RNU6-1329P-201ENST00000365664 107 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 SNORD116-11-201ENST00000383882 92 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 RNU6-1013P-201ENST00000384180 107 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 SNORA67.3-201ENST00000384366 140 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 RPS29P13-201ENST00000402041 169 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 RNU2-41P-201ENST00000410991 178 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 UBE2V1P4-201ENST00000425374 344 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC008628.2-201ENST00000502605 298 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC092436.3-201ENST00000511788 257 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 RNU7-30P-201ENST00000516835 62 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC109479.2-201ENST00000517842 174 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 MIR4648-201ENST00000580107 72 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC091135.1-201ENST00000585943 307 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 VN1R107P-201ENST00000601784 209 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC009994.1-201ENST00000606889 253 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC013412.1-201ENST00000610687 192 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC025253.1-201ENST00000613623 543 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 AC104260.1-201ENST00000616660 539 ntBASIC2.13□□□□□ -2.07
RTL3Q8N8U3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RTL3Q8N8U3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RTL3Q8N8U3 RNU6-1252P-201ENST00000363054 104 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 Y_RNA.184-201ENST00000363884 108 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 RNU5E-4P-201ENST00000364931 120 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 Y_RNA.339-201ENST00000365325 102 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 SNORA70B-201ENST00000384210 135 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 RNU6-611P-201ENST00000384276 104 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 MIR518A2-201ENST00000384966 87 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 SNORD73A-201ENST00000386062 65 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AL512604.1-201ENST00000404812 257 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AL356432.1-201ENST00000405809 419 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AC245102.2-201ENST00000448956 180 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 MTND1P17-201ENST00000448961 204 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.12□□□□□ -2.07
RTL3Q8N8U3 RPL30P1-201ENST00000488676 339 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 FGF7P4-201ENST00000509595 295 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 RNU6-507P-201ENST00000516045 100 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 IGKV3-31-201ENST00000523109 329 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AC022616.8-201ENST00000533569 253 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AC025423.5-201ENST00000550230 219 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AC064836.2-201ENST00000609491 462 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.12□□□□□ -2.07
RTL3Q8N8U3 uc_338.5-201ENST00000611839 155 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 AC092881.1-201ENST00000638218 2733 ntBASIC2.12□□□□□ -2.07
RTL3Q8N8U3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
RTL3Q8N8U3 ZNF702P-202ENST00000434269 1966 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms