Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-1□□□□□ -2.57
DDX60Q8IY21 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC-1□□□□□ -2.57
DDX60Q8IY21 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-1□□□□□ -2.57
DDX60Q8IY21 RNU6-657P-201ENST00000383904 107 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-1.01□□□□□ -2.57
DDX60Q8IY21 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-1.01□□□□□ -2.57
DDX60Q8IY21 MTCYBP10-201ENST00000424905 650 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 RNU1-131P-201ENST00000458943 161 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 AC023194.1-201ENST00000493084 308 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-1.01□□□□□ -2.57
DDX60Q8IY21 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-1.01□□□□□ -2.57
DDX60Q8IY21 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-1.01□□□□□ -2.57
DDX60Q8IY21 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.01□□□□□ -2.57
DDX60Q8IY21 MTND1P15-201ENST00000579262 949 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 SNORA75.2-201ENST00000391138 150 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-1.01□□□□□ -2.57
DDX60Q8IY21 AC114755.3-201ENST00000481111 251 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 AC027338.1-201ENST00000514840 825 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 AP002453.2-201ENST00000533503 320 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 AC018630.3-201ENST00000542637 96 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-1.01□□□□□ -2.57
DDX60Q8IY21 AC120349.3-201ENST00000624377 529 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 MTND5P31-201ENST00000419366 1374 ntBASIC-1.01□□□□□ -2.57
DDX60Q8IY21 ELOCP9-201ENST00000418624 239 ntBASIC-1.02□□□□□ -2.57
DDX60Q8IY21 AC007919.1-201ENST00000429380 217 ntBASIC-1.02□□□□□ -2.57
DDX60Q8IY21 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-1.02□□□□□ -2.57
DDX60Q8IY21 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-1.02□□□□□ -2.57
DDX60Q8IY21 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-1.02□□□□□ -2.57
DDX60Q8IY21 RNA5SP517-201ENST00000364724 117 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 SNORD82-201ENST00000365530 70 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-1.03□□□□□ -2.57
DDX60Q8IY21 RNU2-59P-201ENST00000410482 191 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 AL162725.1-201ENST00000435405 301 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 MTCO1P19-201ENST00000443487 500 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 AC003071.1-201ENST00000451219 789 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 RPL39P39-201ENST00000455840 151 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 MTCYBP43-201ENST00000513621 740 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 AK6P2-201ENST00000549020 471 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-1.03□□□□□ -2.57
DDX60Q8IY21 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-1.03□□□□□ -2.57
DDX60Q8IY21 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-1.03□□□□□ -2.57
DDX60Q8IY21 AL451064.1-201ENST00000607718 471 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 AC080188.3-201ENST00000624842 748 ntBASIC-1.03□□□□□ -2.57
DDX60Q8IY21 Y_RNA.362-201ENST00000365518 110 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 RNU6-10P-201ENST00000384036 107 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 RNU6-15P-201ENST00000384534 107 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 RNU2-33P-201ENST00000410344 192 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-1.03□□□□□ -2.58
DDX60Q8IY21 AC073910.1-201ENST00000445047 438 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 ZNF886P-201ENST00000450781 723 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 AKIRIN2P1-201ENST00000505898 352 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 RBBP4P6-201ENST00000508098 202 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 RNU6-488P-201ENST00000515918 99 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 MTND4LP26-201ENST00000518144 282 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 AC004805.2-201ENST00000605382 482 ntBASIC-1.03□□□□□ -2.58
DDX60Q8IY21 RNU6-862P-201ENST00000362804 105 ntBASIC-1.04□□□□□ -2.58
DDX60Q8IY21 SNORA75.6-201ENST00000391318 127 ntBASIC-1.04□□□□□ -2.58
DDX60Q8IY21 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-1.04□□□□□ -2.58
DDX60Q8IY21 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-1.04□□□□□ -2.58
DDX60Q8IY21 MIR3976-201ENST00000606807 139 ntBASIC-1.04□□□□□ -2.58
DDX60Q8IY21 PCGEM1.1-201ENST00000613431 131 ntBASIC-1.04□□□□□ -2.58
DDX60Q8IY21 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-1.04□□□□□ -2.58
DDX60Q8IY21 MIR4320-201ENST00000636981 65 ntBASIC-1.04□□□□□ -2.58
DDX60Q8IY21 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-1.05□□□□□ -2.58
DDX60Q8IY21 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.05□□□□□ -2.58
DDX60Q8IY21 RNU6-1280P-201ENST00000365211 107 ntBASIC-1.05□□□□□ -2.58
DDX60Q8IY21 C1DP2-201ENST00000418167 426 ntBASIC-1.05□□□□□ -2.58
DDX60Q8IY21 MTND2P5-201ENST00000432656 1006 ntBASIC-1.05□□□□□ -2.58
DDX60Q8IY21 MTND4P32-201ENST00000437189 1237 ntBASIC-1.05□□□□□ -2.58
DDX60Q8IY21 C1DP4-201ENST00000455429 424 ntBASIC-1.05□□□□□ -2.58
DDX60Q8IY21 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-1.05□□□□□ -2.58
DDX60Q8IY21 AC027288.2-201ENST00000553028 243 ntBASIC-1.05□□□□□ -2.58
DDX60Q8IY21 AC004067.1-201ENST00000608733 700 ntBASIC-1.05□□□□□ -2.58
DDX60Q8IY21 RNU6-152P-201ENST00000384037 107 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 RNU6-679P-201ENST00000391003 106 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AL392003.1-201ENST00000434394 243 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AC069257.2-201ENST00000441819 155 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 MTND1P17-201ENST00000448961 204 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-1.06□□□□□ -2.58
DDX60Q8IY21 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-1.06□□□□□ -2.58
DDX60Q8IY21 MIR4709-201ENST00000577272 72 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 MIR6755-201ENST00000619993 66 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 MTCYBP38-201ENST00000417160 1123 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-1.06□□□□□ -2.58
DDX60Q8IY21 MIR5697-201ENST00000578045 78 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AF038458.1-201ENST00000588406 262 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 AL034555.1-201ENST00000604816 211 ntBASIC-1.06□□□□□ -2.58
DDX60Q8IY21 Y_RNA.62-201ENST00000362840 99 ntBASIC-1.07□□□□□ -2.58
DDX60Q8IY21 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-1.07□□□□□ -2.58
DDX60Q8IY21 AC123900.1-201ENST00000420390 96 ntBASIC-1.07□□□□□ -2.58
DDX60Q8IY21 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-1.07□□□□□ -2.58
DDX60Q8IY21 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms