Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AC112220.1-201ENST00000434628 355 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 snoU13.22-201ENST00000459428 104 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 RNU7-23P-201ENST00000459465 62 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 RNA5SP54-201ENST00000516951 92 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AK6P2-201ENST00000549020 471 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 RPS15AP11-201ENST00000594193 385 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AC008749.1-201ENST00000597650 306 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 AC010889.1-201ENST00000566193 2666 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 MTND5P35-201ENST00000557537 1720 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 MIR208A-201ENST00000362287 71 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-799P-201ENST00000363567 107 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-727P-201ENST00000363592 107 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 SNORA70.4-201ENST00000365509 134 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-1062P-201ENST00000383908 107 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.446-201ENST00000384178 104 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 SNORD17-201ENST00000390930 237 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 FCF1P8-201ENST00000510322 597 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 AC115990.1-201ENST00000526957 301 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 AC006001.4-201ENST00000622243 395 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 AC127459.3-201ENST00000624328 466 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 MFSD8-233ENST00000641482 4860 ntBASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM48Q8IWZ4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.83-201ENST00000363005 113 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.179-201ENST00000363844 90 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.199-201ENST00000364014 102 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 RNU1-33P-201ENST00000364249 162 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-326P-201ENST00000365480 107 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 RNVU1-14-201ENST00000384770 164 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 MIR147B-201ENST00000390185 80 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 U3.26-201ENST00000391236 204 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 SNORA11.1-201ENST00000408133 129 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 AC245291.1-201ENST00000419501 328 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 MRPS10P1-201ENST00000448483 130 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 RN7SL601P-201ENST00000471221 293 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 SNORA70.14-201ENST00000516205 110 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.683-201ENST00000516508 93 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 RPL21P9-201ENST00000556149 474 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 CYP4A27P-201ENST00000567218 190 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 AC005176.2-201ENST00000596933 147 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 AL162713.1-201ENST00000604480 262 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 AC007179.3-201ENST00000604976 235 ntBASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM48Q8IWZ4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.331-201ENST00000365267 102 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.418-201ENST00000384029 102 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-378P-201ENST00000384324 107 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-748P-201ENST00000384648 107 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 CBX3P9-201ENST00000402326 552 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 AP000567.1-201ENST00000406413 156 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 RPS26P42-201ENST00000413485 326 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 AL031183.1-201ENST00000457667 207 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 AP002884.2-201ENST00000471647 395 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 RPL7P47-201ENST00000497299 556 ntBASIC3.35□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-966P-201ENST00000516479 104 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms