Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC090096.1-201ENST00000489168 390 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC022447.4-201ENST00000504053 364 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC093303.1-201ENST00000514549 295 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 RNU6-1170P-201ENST00000515974 106 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 RNU2-53P-201ENST00000516257 147 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 RNA5SP320-201ENST00000516263 124 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 CBX3P8-201ENST00000532412 525 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC021231.3-201ENST00000558497 370 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 MIR3136-201ENST00000583498 78 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC060766.3-201ENST00000591442 263 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AL158827.2-201ENST00000602494 330 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC107871.2-201ENST00000612894 502 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AC022140.2-201ENST00000623500 188 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AL691447.3-201ENST00000635020 330 ntBASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.7□□□□□ -1.98
SCN4BQ8IWT1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 Y_RNA.813-201ENST00000364639 102 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 SNORA26.3-201ENST00000391119 136 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 SNORD88.1-201ENST00000408684 91 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 RNA5SP344-201ENST00000411081 104 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC243428.1-201ENST00000421099 264 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AL590135.1-201ENST00000422215 156 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC019205.3-201ENST00000424573 156 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 EIF4EP4-201ENST00000424916 578 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC016700.2-201ENST00000446011 156 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AL513328.1-201ENST00000446460 224 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 RNU7-26P-201ENST00000458980 63 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 RPL30P1-201ENST00000488676 339 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC015911.1-201ENST00000495111 156 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC023824.2-201ENST00000566185 400 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 MIR5571-201ENST00000577998 113 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 AC105245.1-201ENST00000581934 244 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 CYP2C61P-201ENST00000604072 290 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 SNORD98-201ENST00000636377 67 ntBASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SCN4BQ8IWT1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 Y_RNA.48-201ENST00000362710 103 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 RNU6-694P-201ENST00000364071 147 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 RNU4-76P-201ENST00000364509 141 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 RNU4-56P-201ENST00000364700 142 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AL590004.2-201ENST00000404787 371 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 U6atac.2-201ENST00000408644 118 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AIMP1P2-201ENST00000425294 312 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AL353705.4-201ENST00000449661 238 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AC080013.2-201ENST00000460866 323 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AL121594.1-201ENST00000475906 575 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 RNU6-264P-201ENST00000517134 104 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 MRPS36P4-201ENST00000534436 298 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 MIR4435-1-201ENST00000582552 80 ntBASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN4BQ8IWT1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 RNU6-595P-201ENST00000363944 107 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 SNORA38-201ENST00000363946 132 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 RNU6-1040P-201ENST00000383974 107 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 SNORA29-201ENST00000384183 140 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 CBX3P9-201ENST00000402326 552 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 RNA5SP508-201ENST00000411327 119 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 AC008267.5-201ENST00000424928 265 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 AL353997.1-201ENST00000432936 108 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 AC027575.1-201ENST00000481064 460 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 HMGB1P35-201ENST00000503360 598 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 AC022493.2-201ENST00000506122 481 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 RNU6-567P-201ENST00000516746 107 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 SNORA31.16-201ENST00000516773 139 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 AC093249.1-201ENST00000567049 203 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 7SK.7-201ENST00000603504 247 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 AL034555.1-201ENST00000604816 211 ntBASIC2.67□□□□□ -1.98
SCN4BQ8IWT1 AC005014.2-201ENST00000607795 599 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms