Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SNORA31.23-201ENST00000517219 133 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC027176.1-201ENST00000560204 514 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC004817.2-201ENST00000561794 651 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC006600.1-201ENST00000572529 153 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC009163.5-201ENST00000575421 637 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC124312.5-201ENST00000604451 268 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 AC233263.6-201ENST00000631132 1963 ntBASIC3.27□□□□□ -1.89
UBE3BQ7Z3V4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-874P-201ENST00000362390 105 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 RNY3P11-201ENST00000364153 102 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-574P-201ENST00000384265 107 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 Y_RNA.574-201ENST00000384766 95 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 SNORA12.2-201ENST00000391040 156 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 DPH3P2-201ENST00000422618 250 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 RNU7-23P-201ENST00000459465 62 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-581P-201ENST00000516214 105 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 Y_RNA.715-201ENST00000517082 110 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 AC040926.1-201ENST00000530195 238 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 AC007536.1-201ENST00000533382 349 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 MIR4298-201ENST00000584380 73 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 AC019159.1-201ENST00000605094 187 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 U2.1-201ENST00000618978 145 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 AC108206.1-201ENST00000570186 4159 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 AC009541.1-201ENST00000438279 2662 ntBASIC3.26□□□□□ -1.89
UBE3BQ7Z3V4 ADAM3A-203ENST00000461344 2157 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 SNORD56.1-201ENST00000362913 68 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-487P-201ENST00000365430 104 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 SNORA63.7-201ENST00000365579 123 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-843P-201ENST00000384454 104 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 Y_RNA.526-201ENST00000384572 110 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 SNORA69.1-201ENST00000390904 137 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 MIR190B-201ENST00000401119 79 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 Y_RNA.592-201ENST00000410274 109 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AC023141.4-201ENST00000412031 328 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 EIF1AXP1-201ENST00000419267 435 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AL358453.1-201ENST00000422522 250 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 MTCO3P29-201ENST00000432119 779 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AC073910.1-201ENST00000445047 438 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AL513328.1-201ENST00000446460 224 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AC103975.1-201ENST00000482506 483 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AP001025.1-201ENST00000486139 332 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 CKS1BP7-201ENST00000522230 235 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AP000867.2-201ENST00000532468 320 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AC016256.1-201ENST00000547971 354 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 MIR3149-201ENST00000584629 83 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 AC100812.1-201ENST00000607622 580 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 SCARNA4-201ENST00000629045 128 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 MIR3529-201ENST00000637713 78 ntBASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
UBE3BQ7Z3V4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-799P-201ENST00000363567 107 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 Y_RNA.152-201ENST00000363578 100 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 RNU4-9P-201ENST00000364951 139 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 SET-203ENST00000372688 801 ntTSL 2 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-1286P-201ENST00000383871 107 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-1109P-201ENST00000391187 107 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 AL590004.2-201ENST00000404787 371 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 MTCO3P19-201ENST00000415864 321 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 AC009963.1-201ENST00000417265 157 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 MRPS35P2-201ENST00000508242 191 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 RNU7-175P-201ENST00000515915 61 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 RNA5SP320-201ENST00000516263 124 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 RNU6-635P-201ENST00000516651 102 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 ACA59.2-201ENST00000517061 156 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 7SK.7-201ENST00000603504 247 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 U4.1-201ENST00000620349 87 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 MIR3199-2-201ENST00000636243 86 ntBASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
UBE3BQ7Z3V4 AC233981.2-201ENST00000611524 1614 ntBASIC3.23□□□□□ -1.89
UBE3BQ7Z3V4 ZNF72P-201ENST00000425869 1908 ntBASIC3.23□□□□□ -1.89
UBE3BQ7Z3V4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
UBE3BQ7Z3V4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms