Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 HAUS6P2-201ENST00000433254 2404 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 MIR148B-201ENST00000362252 99 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 RNU6-238P-201ENST00000363313 106 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 Y_RNA.176-201ENST00000363815 109 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 Y_RNA.193-201ENST00000363979 102 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 Y_RNA.210-201ENST00000364161 110 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 Y_RNA.358-201ENST00000365491 99 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 Y_RNA.512-201ENST00000384518 102 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 EIF1AXP1-201ENST00000419267 435 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AC105272.1-201ENST00000438604 198 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AC009296.1-201ENST00000443146 155 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AL353705.4-201ENST00000449661 238 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 RPL30P12-201ENST00000474666 353 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 RPS26P21-201ENST00000475397 348 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AC104564.1-201ENST00000493028 407 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 RPS27P26-201ENST00000494583 239 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 SEM1P1-201ENST00000506694 209 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 RAC1P5-201ENST00000512182 576 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 RNU5F-8P-201ENST00000515941 111 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 RNU6-911P-201ENST00000516523 104 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 GTF3AP2-201ENST00000557014 266 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AC090897.2-201ENST00000581715 130 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 MIR3149-201ENST00000584629 83 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AC008739.2-201ENST00000597006 317 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AL356157.2-201ENST00000605122 111 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AL450472.1-202ENST00000637286 180 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AC004944.1-201ENST00000517807 3059 ntBASIC2.39□□□□□ -2.03
C9orf139Q6ZV77 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RNU5B-2P-201ENST00000363036 113 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RNU6-1141P-201ENST00000364520 107 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RNU6-487P-201ENST00000365430 104 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 Y_RNA.452-201ENST00000384202 108 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 SNORA36A-201ENST00000384221 132 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RNU6-505P-201ENST00000384427 107 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 Y_RNA.504-201ENST00000384481 104 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RPL21P1-201ENST00000399532 476 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AL133475.1-201ENST00000404414 305 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RNA5SP274-201ENST00000410484 108 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 PTGES3P4-201ENST00000426243 356 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AC004383.1-201ENST00000438135 289 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RNU7-87P-201ENST00000459343 62 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 RN7SL20P-201ENST00000488827 297 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 SCGB1D5P-201ENST00000515134 247 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 Y_RNA.706-201ENST00000516933 99 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 SNORD19.2-201ENST00000516978 73 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AC109329.1-201ENST00000518744 317 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 HSPE1P4-201ENST00000550617 308 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 7SK.7-201ENST00000603504 247 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AC010889.1-201ENST00000566193 2666 ntBASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
C9orf139Q6ZV77 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RNU6-222P-201ENST00000362438 107 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RNU6-1285P-201ENST00000363480 105 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 SNORD21-201ENST00000383953 95 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RNU6-17P-201ENST00000384245 107 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 SNORA51.11-201ENST00000384442 131 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RNU6-18P-201ENST00000384527 107 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RNU6-1222P-201ENST00000384615 107 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RNU6-19P-201ENST00000384718 107 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RNU6-750P-201ENST00000390946 107 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RPL21P3-201ENST00000395517 478 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RNA5SP390-201ENST00000410191 113 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 AC114482.1-201ENST00000418010 247 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 RPL39P29-201ENST00000447779 157 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 AC146507.2-201ENST00000460608 476 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 AC087477.1-201ENST00000465747 340 ntBASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf139Q6ZV77 ANXA2P1-201ENST00000505539 926 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms