Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU2-53P-201ENST00000516257 147 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 RN7SKP287-201ENST00000516546 266 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 SNORD60.2-201ENST00000516883 86 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC007751.1-201ENST00000529260 376 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC022523.2-201ENST00000561045 150 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC093648.1-201ENST00000623546 606 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 RNU6-674P-201ENST00000363831 107 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 SNORA4.2-201ENST00000365313 147 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 RNU6-359P-201ENST00000365466 108 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 RNA5SP496-201ENST00000391240 109 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AL603865.2-201ENST00000401679 213 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 RNU6-1245P-201ENST00000411130 106 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 MTCO2P8-201ENST00000412213 658 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 RNU6-714P-201ENST00000516963 103 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AC009902.1-201ENST00000519351 183 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AC093519.1-201ENST00000566109 298 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AC095057.3-201ENST00000567102 1157 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 MIR5695-201ENST00000579717 85 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AC011451.2-201ENST00000604303 598 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AL356157.2-201ENST00000605122 111 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 RNU6-87P-201ENST00000607561 108 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 AL079343.1-201ENST00000572358 1771 ntBASIC-0.11□□□□□ -2.43
CSPG4Q6UVK1 RNU4-45P-201ENST00000365469 141 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 RNU4-48P-201ENST00000365559 182 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 USP9YP14-201ENST00000430663 563 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 RPL39P6-201ENST00000448289 150 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AC026410.2-201ENST00000460281 156 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AC130509.1-201ENST00000464158 433 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 MTND4LP26-201ENST00000518144 282 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AC138915.2-201ENST00000569776 97 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AP000943.4-201ENST00000622912 357 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 MTCO1P21-201ENST00000416634 589 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 MTCO3P45-201ENST00000443036 613 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 FABP5P15-201ENST00000453566 214 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 RPL18AP17-201ENST00000455326 198 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 snoU13.14-201ENST00000459372 104 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AC027338.1-201ENST00000514840 825 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 MTCO2P15-201ENST00000532655 656 ntBASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.12□□□□□ -2.43
CSPG4Q6UVK1 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 MIR635-201ENST00000384830 98 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 FCF1P10-201ENST00000407590 479 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 ELOCP9-201ENST00000418624 239 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 DAP3P1-201ENST00000441522 278 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 U7.7-201ENST00000459276 60 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 HMGN1P12-201ENST00000499125 195 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AC109445.1-201ENST00000512356 383 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 RNU6-863P-201ENST00000515989 104 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 MIR4709-201ENST00000577272 72 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AC025627.3-201ENST00000582078 182 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AP002906.1-201ENST00000603405 233 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 MIR18A-201ENST00000362310 71 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 RNU6-223P-201ENST00000362830 107 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 RNU6-655P-201ENST00000362858 107 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 RNU6-188P-201ENST00000364207 107 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 SUGT1P1-201ENST00000379514 476 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 RNU6-163P-201ENST00000384396 106 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 SNORD116-13-201ENST00000384408 92 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 CBX3P9-201ENST00000402326 552 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 DPRXP1-201ENST00000426312 460 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 MTCO2P7-201ENST00000446518 666 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 RPF2P2-201ENST00000504693 896 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 RNU6-922P-201ENST00000516753 99 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AC022861.1-201ENST00000522981 663 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AC025423.5-201ENST00000550230 219 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AL391001.1-201ENST00000602747 715 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AC098483.2-201ENST00000603158 454 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 AC090617.9-201ENST00000623751 147 ntBASIC-0.13□□□□□ -2.43
CSPG4Q6UVK1 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 SNORD114-19-201ENST00000363072 75 ntBASIC-0.14□□□□□ -2.43
CSPG4Q6UVK1 RNU6-512P-201ENST00000364438 103 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms