Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 U6.105-201ENST00000637379 88 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF43Q68DV7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF43Q68DV7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
RNF43Q68DV7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RNF43Q68DV7 AC068700.1-201ENST00000565862 3754 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF43Q68DV7 SNORD56.1-201ENST00000362913 68 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 RNU4-10P-201ENST00000364383 140 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 RNA5SP267-201ENST00000364893 126 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 Y_RNA.337-201ENST00000365312 102 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 Y_RNA.525-201ENST00000384570 113 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 RNU6-476P-201ENST00000384726 107 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 ELOCP21-201ENST00000412558 336 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 AC009963.1-201ENST00000417265 157 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF43Q68DV7 SNRPEP9-201ENST00000436794 238 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 RNU7-107P-201ENST00000459121 61 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 RPL30P12-201ENST00000474666 353 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF43Q68DV7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF43Q68DV7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 RNA5SP291-201ENST00000517222 105 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 CYCSP23-201ENST00000519781 313 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 HSPE1P4-201ENST00000550617 308 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 MED28P6-201ENST00000558776 231 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.97□□□□□ -1.77
RNF43Q68DV7 AL356157.2-201ENST00000605122 111 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 RNU1-30P-201ENST00000606575 163 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF43Q68DV7 AL136964.1-201ENST00000622038 2990 ntBASIC3.97□□□□□ -1.77
RNF43Q68DV7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF43Q68DV7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF43Q68DV7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
RNF43Q68DV7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RNF43Q68DV7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF43Q68DV7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF43Q68DV7 Y_RNA.179-201ENST00000363844 90 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 RNA5SP97-201ENST00000365006 84 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 MIR218-2-201ENST00000385006 110 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 MIR518D-201ENST00000385014 87 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 SNORD37.2-201ENST00000391075 66 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 RNU6-460P-201ENST00000391158 108 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 MIR888-201ENST00000401186 77 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 AC002075.2-201ENST00000425207 252 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.96□□□□□ -1.78
RNF43Q68DV7 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF43Q68DV7 AP000705.1-201ENST00000454567 350 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 AL133162.1-201ENST00000463228 453 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF43Q68DV7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.96□□□□□ -1.78
RNF43Q68DV7 RNA5SP76-201ENST00000516277 87 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 Y_RNA.709-201ENST00000516952 92 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 SNORA31.20-201ENST00000517111 133 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 RNU4-60P-201ENST00000517239 135 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF43Q68DV7 AC109810.1-201ENST00000534066 224 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 LINC00933-203ENST00000559812 219 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 AC136601.2-201ENST00000604356 474 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 AL591424.2-201ENST00000617023 128 ntBASIC3.96□□□□□ -1.78
RNF43Q68DV7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF43Q68DV7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RNF43Q68DV7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF43Q68DV7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.95□□□□□ -1.78
RNF43Q68DV7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF43Q68DV7 RNVU1-14-201ENST00000384770 164 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 AL512633.1-201ENST00000399931 655 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 AC006461.1-201ENST00000412637 326 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 RPL21P66-201ENST00000426566 466 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 FTH1P6-201ENST00000430768 320 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 RPL23AP14-201ENST00000468281 468 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 RN7SL293P-201ENST00000481765 281 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.95□□□□□ -1.78
RNF43Q68DV7 RNA5SP54-201ENST00000516951 92 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF43Q68DV7 MIR5187-201ENST00000583479 76 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.95□□□□□ -1.78
RNF43Q68DV7 AC006254.2-201ENST00000603259 279 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 AC005000.2-201ENST00000605468 310 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 RNA5SP108-201ENST00000605921 117 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.95□□□□□ -1.78
RNF43Q68DV7 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF43Q68DV7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNF43Q68DV7 AL133412.1-201ENST00000380194 2992 ntBASIC3.95□□□□□ -1.78
RNF43Q68DV7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF43Q68DV7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF43Q68DV7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF43Q68DV7 AC006504.1-201ENST00000562493 3666 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 MTND5P32-201ENST00000560711 1802 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 RNU6-801P-201ENST00000364087 105 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 RNU6-1310P-201ENST00000384153 107 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 RNU6-1144P-201ENST00000384247 104 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 Y_RNA.572-201ENST00000384757 98 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 MIR544A-201ENST00000384855 91 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 MIR549A-201ENST00000385268 96 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms