Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC138623.1-201ENST00000418060 216 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 COTL1P1-201ENST00000422309 375 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 PTGES3P4-201ENST00000426243 356 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 OSTCP8-201ENST00000445117 448 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 U8.22-201ENST00000459141 133 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AP001025.1-201ENST00000486139 332 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AF186996.7-201ENST00000492781 209 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 RNU6-711P-201ENST00000517255 106 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AC091144.1-201ENST00000519573 138 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AC090517.1-201ENST00000569307 266 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 LARP7P3-201ENST00000579888 337 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 RAC1P9-201ENST00000604990 392 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AL359198.2-201ENST00000611836 194 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AC007792.1-201ENST00000623023 402 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AL137790.1-201ENST00000634283 177 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 AC009487.2-201ENST00000420969 6821 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 Z75746.1-201ENST00000440243 2080 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 MIR147B-201ENST00000390185 80 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 USP9YP16-201ENST00000430287 407 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AL445305.1-201ENST00000432577 575 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AC244505.4-201ENST00000434905 287 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 SSXP5-201ENST00000443473 287 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 USP9YP23-201ENST00000455085 407 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 snoU13.6-201ENST00000458785 104 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 RNU7-23P-201ENST00000459465 62 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 RNA5SP367-201ENST00000516557 118 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 SNORA40.15-201ENST00000516884 107 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AC022868.1-201ENST00000517767 391 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AC004817.2-201ENST00000561794 651 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 ELOCP29-201ENST00000588193 334 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AL138880.2-201ENST00000616214 239 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AL159153.1-201ENST00000619688 317 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 SCARNA4-201ENST00000629045 128 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 SNORA43.4-201ENST00000629559 138 ntBASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC178Q5BJE1 AP000560.1-201ENST00000624150 1937 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 Y_RNA.551-201ENST00000384661 102 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 RNU6-541P-201ENST00000384709 110 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 RPL21P75-201ENST00000396599 483 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 RPL21P28-201ENST00000401418 483 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AL590556.1-201ENST00000423231 483 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 PCNPP5-201ENST00000452246 481 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 RPL21P39-201ENST00000463605 483 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 RN7SL499P-201ENST00000481141 276 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AC087190.1-201ENST00000484462 480 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AC107032.1-201ENST00000485945 480 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AC132942.1-201ENST00000486753 483 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AC093591.1-201ENST00000491435 481 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 RPL21P16-201ENST00000495531 483 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AC093852.1-201ENST00000503587 266 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AC016632.1-201ENST00000503994 196 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 ANXA2P1-201ENST00000505539 926 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AC011471.1-201ENST00000585766 187 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 AC091152.3-201ENST00000604227 325 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 RPL23AP88-201ENST00000605759 454 ntBASIC3.34□□□□□ -1.87
CCDC178Q5BJE1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CCDC178Q5BJE1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC178Q5BJE1 AC010889.1-201ENST00000566193 2666 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 RNU6-212P-201ENST00000362642 104 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AC244670.1-201ENST00000436879 112 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AL135938.1-201ENST00000443141 297 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AL441985.1-201ENST00000457727 251 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 SNORA31.1-201ENST00000515993 133 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 SNORA31.5-201ENST00000516190 133 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 EIF4BP1-201ENST00000554881 351 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AC110588.1-201ENST00000559699 137 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AC090897.2-201ENST00000581715 130 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AL355877.2-201ENST00000603670 358 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.33□□□□□ -1.88
CCDC178Q5BJE1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC178Q5BJE1 RNU6-1141P-201ENST00000364520 107 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms