Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USP41Q3LFD5 Y_RNA.635-201ENST00000459041 101 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC090515.1-201ENST00000465295 476 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AL121594.1-201ENST00000475906 575 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.52□□□□□ -2.01
USP41Q3LFD5 RNU6-1016P-201ENST00000516689 94 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.52□□□□□ -2.01
USP41Q3LFD5 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC078795.3-201ENST00000602913 472 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AL670379.2-201ENST00000604983 252 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC016727.1-205ENST00000605437 569 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC009233.1-201ENST00000616477 371 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 AC099654.5-201ENST00000636479 350 ntBASIC2.52□□□□□ -2.01
USP41Q3LFD5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USP41Q3LFD5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
USP41Q3LFD5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 Y_RNA.263-201ENST00000364659 114 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 RNU6-220P-201ENST00000390919 107 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 RNU4-14P-201ENST00000410858 122 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 CYCSP48-201ENST00000417124 323 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 AIMP1P2-201ENST00000425294 312 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 snoU13.14-201ENST00000459372 104 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 RPL30P1-201ENST00000488676 339 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 AC104564.1-201ENST00000493028 407 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 AC016632.1-201ENST00000503994 196 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 IGKV3-31-201ENST00000523109 329 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 AC093249.1-201ENST00000567049 203 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 RPS3AP23-202ENST00000574601 686 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 AC090517.3-201ENST00000625170 141 ntBASIC2.51□□□□□ -2.01
USP41Q3LFD5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP41Q3LFD5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.51□□□□□ -2.01
USP41Q3LFD5 snoU2_19.1-201ENST00000362361 80 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 RNU1-72P-201ENST00000362976 153 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 RNU6-1032P-201ENST00000384100 107 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 Y_RNA.482-201ENST00000384377 111 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 Y_RNA.529-201ENST00000384586 119 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 RN7SKP61-201ENST00000410642 295 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 AC078809.1-201ENST00000427601 140 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
USP41Q3LFD5 SNRPEP8-201ENST00000442866 260 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 AC080013.2-201ENST00000460866 323 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.5□□□□□ -2.01
USP41Q3LFD5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.5□□□□□ -2.01
USP41Q3LFD5 RNU5F-2P-201ENST00000516066 82 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.5□□□□□ -2.01
USP41Q3LFD5 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 AL132765.2-201ENST00000610812 351 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 AL449363.1-201ENST00000617815 186 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 SNORD98-201ENST00000636377 67 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 MIR1302-1-201ENST00000637932 143 ntBASIC2.5□□□□□ -2.01
USP41Q3LFD5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 RNU6-593P-201ENST00000364716 112 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 SNORA36A-201ENST00000384221 132 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 Y_RNA.474-201ENST00000384341 102 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 MIR504-201ENST00000385065 83 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 CBX3P9-201ENST00000402326 552 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 RNU6-1050P-201ENST00000410388 107 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 FO393415.2-201ENST00000480085 343 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 CKS1BP2-201ENST00000497342 240 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 SNORA31.16-201ENST00000516773 139 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 IMMP1LP2-201ENST00000552954 492 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC109446.1-201ENST00000566172 220 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 MIR4273-201ENST00000582824 84 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 MIR5007-201ENST00000583098 95 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC113139.1-201ENST00000605049 239 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC018462.2-201ENST00000605375 395 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC009229.3-201ENST00000608056 282 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC112487.2-201ENST00000637950 304 ntBASIC2.49□□□□□ -2.01
USP41Q3LFD5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.49□□□□□ -2.01
USP41Q3LFD5 AC092268.1-201ENST00000342691 405 ntBASIC2.48□□□□□ -2.01
USP41Q3LFD5 RNU6-142P-201ENST00000384019 107 ntBASIC2.48□□□□□ -2.01
USP41Q3LFD5 RNU6-968P-201ENST00000384076 107 ntBASIC2.48□□□□□ -2.01
USP41Q3LFD5 Y_RNA.594-201ENST00000410373 140 ntBASIC2.48□□□□□ -2.01
USP41Q3LFD5 RNU6-370P-201ENST00000411008 104 ntBASIC2.48□□□□□ -2.01
USP41Q3LFD5 RNU6-1304P-201ENST00000411374 106 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms