Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 RNU1-14P-201ENST00000362759 152 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 RNU6-525P-201ENST00000363685 104 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 Y_RNA.323-201ENST00000365157 109 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 Y_RNA.432-201ENST00000384087 111 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 TOMM22P1-201ENST00000418578 312 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 CALM2P4-201ENST00000430810 426 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 GOT2P5-201ENST00000433995 546 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 AL021397.1-201ENST00000451806 248 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 RPL35AP15-201ENST00000468042 339 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 S100A11P1-201ENST00000477525 312 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 AC022137.1-201ENST00000483735 151 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 AL592156.1-201ENST00000508758 304 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 PPBPP1-201ENST00000510807 373 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 AC026726.1-201ENST00000512859 601 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 SNORA70.16-201ENST00000516390 95 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 RNA5SP490-201ENST00000517141 136 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 AL161756.2-201ENST00000604597 246 ntBASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTC1Q2NKJ3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 MIR518D-201ENST00000385014 87 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 AC078809.1-201ENST00000427601 140 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 AL445584.1-201ENST00000431451 330 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 AL500522.2-201ENST00000448562 343 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 RNA5SP497-201ENST00000516081 97 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 SNORA31.16-201ENST00000516773 139 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 RNU6-1183P-201ENST00000517054 60 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 LINC00933-203ENST00000559812 219 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 AC025754.2-201ENST00000606491 432 ntBASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTC1Q2NKJ3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 MIR448-201ENST00000362131 111 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 Y_RNA.52-201ENST00000362760 96 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 Y_RNA.107-201ENST00000363190 121 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 Y_RNA.342-201ENST00000365352 113 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 RNU6-484P-201ENST00000384016 107 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 YME1L1P1-201ENST00000429435 297 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 HMGN2P21-201ENST00000447764 270 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 AC107297.1-201ENST00000459991 176 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 RN7SL812P-201ENST00000493791 279 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 RNA5SP519-201ENST00000516480 119 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 HSPE1P5-201ENST00000561489 272 ntBASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTC1Q2NKJ3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 AL589743.1-201ENST00000551932 2712 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 Y_RNA.17-201ENST00000362433 111 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 RNA5SP502-201ENST00000362694 119 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 MIR320B2-201ENST00000408479 138 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 AC073261.1-201ENST00000429409 121 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 RPL39P39-201ENST00000455840 151 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 AC103975.1-201ENST00000482506 483 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 RNU7-115P-201ENST00000516433 55 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 RNA5SP73-201ENST00000516744 108 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 SNORA51-201ENST00000606420 132 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 AC099778.2-201ENST00000610904 211 ntBASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTC1Q2NKJ3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms