Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2□□□□□ -2.09
SHROOM1Q2M3G4 U1.36-201ENST00000620684 176 ntBASIC2□□□□□ -2.09
SHROOM1Q2M3G4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SHROOM1Q2M3G4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHROOM1Q2M3G4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-1090P-201ENST00000364065 94 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AP1B1P2-201ENST00000416196 106 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AL117339.3-201ENST00000418733 162 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AC018868.1-201ENST00000491307 315 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AC019235.1-201ENST00000503847 207 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 RNU5F-2P-201ENST00000516066 82 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-189P-201ENST00000516120 101 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-1281P-201ENST00000516223 105 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-506P-201ENST00000516553 94 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AC069113.1-201ENST00000517763 267 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-323P-201ENST00000521915 107 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 CENPUP1-201ENST00000526649 1202 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AC025423.5-201ENST00000550230 219 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AC091135.1-201ENST00000585943 307 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 ELOCP5-201ENST00000604924 333 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AC004492.1-201ENST00000607036 742 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AL357078.3-201ENST00000607528 618 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AL159153.1-201ENST00000619688 317 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AC073534.2-201ENST00000620377 381 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 AC099654.12-201ENST00000639868 649 ntBASIC1.99□□□□□ -2.09
SHROOM1Q2M3G4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 SNORD115-3-201ENST00000363100 82 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 RNA5SP37-201ENST00000365420 130 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-43P-201ENST00000384302 107 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 Y_RNA.481-201ENST00000384373 102 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 CBX3P9-201ENST00000402326 552 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AL590002.1-201ENST00000406554 418 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 RNA5SP247-201ENST00000411181 105 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 EIF4EP2-201ENST00000422816 654 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 RPL30P1-201ENST00000488676 339 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC091874.1-201ENST00000511402 339 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC108729.3-201ENST00000513484 108 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 SNORA14.1-201ENST00000516113 141 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC109479.2-201ENST00000517842 174 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC104576.1-201ENST00000524225 88 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC233702.2-202ENST00000562547 291 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 MIR4255-201ENST00000579351 72 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 BNIP3P25-201ENST00000596023 559 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 snoU13.31-201ENST00000607291 104 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC092807.2-201ENST00000609367 243 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC015540.1-201ENST00000615828 501 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 MTND4P1-201ENST00000457501 1466 ntBASIC1.98□□□□□ -2.09
SHROOM1Q2M3G4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 Y_RNA.38-201ENST00000362617 102 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 SNORD48-201ENST00000364953 64 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-1222P-201ENST00000384615 107 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 FGF7P8-201ENST00000402994 292 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-648P-201ENST00000410190 107 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 Y_RNA.597-201ENST00000410463 100 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 RNU2-32P-201ENST00000411193 191 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 TIMM9P3-201ENST00000428659 274 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AC083904.1-201ENST00000487828 231 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 RNU6-667P-201ENST00000517186 102 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AP005639.2-201ENST00000527592 928 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AC104581.2-201ENST00000572227 430 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 MIR3198-2-201ENST00000577868 80 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 AC010525.2-201ENST00000590920 195 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SHROOM1Q2M3G4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 SNORA8-201ENST00000384574 139 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.554-201ENST00000384672 102 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 SNORA12-201ENST00000391162 147 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 AC013470.1-201ENST00000453438 462 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 snoU13.14-201ENST00000459372 104 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 MIR449C-201ENST00000516047 92 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 SNORA31.16-201ENST00000516773 139 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 AC016957.1-201ENST00000534895 309 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 HSPE1P4-201ENST00000550617 308 ntBASIC1.96□□□□□ -2.1
SHROOM1Q2M3G4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms