Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC007919.1-201ENST00000429380 217 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 HMGB1P37-201ENST00000439613 609 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 RPS4XP2-201ENST00000458402 793 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 RN7SL585P-201ENST00000470538 280 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 RNU6-1256P-201ENST00000516539 103 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 RNU6-197P-201ENST00000516680 100 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 MIR5684-201ENST00000585074 65 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 AL356575.1-201ENST00000603008 283 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 AC019159.1-201ENST00000605094 187 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 AL359198.2-201ENST00000611836 194 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 U73479.1-201ENST00000618062 168 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 AL133383.2-201ENST00000622958 2336 ntBASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RSPO4Q2I0M5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 NEAT1-202ENST00000501122 22743 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 RNA5SP307-201ENST00000362863 116 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 Y_RNA.243-201ENST00000364481 109 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 SNORA18.3-201ENST00000384122 132 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 Y_RNA.549-201ENST00000384657 102 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 RNU6-972P-201ENST00000391208 107 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 MIR1278-201ENST00000408753 81 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 RN7SL807P-201ENST00000470923 297 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 RPL39P34-201ENST00000477141 156 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 RNA5SP360-201ENST00000516555 118 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 RNA5SP179-201ENST00000517284 121 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 AC006272.2-201ENST00000594725 163 ntBASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO4Q2I0M5 LINC01355-201ENST00000566551 5444 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AL139811.1-201ENST00000424779 2299 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 RNY1P10-201ENST00000363268 113 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 RNA5SP50-201ENST00000363731 107 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 Y_RNA.415-201ENST00000384012 112 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 RNU6-301P-201ENST00000384277 107 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 SNORA48.5-201ENST00000391143 135 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AL591419.1-201ENST00000427423 339 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AL356867.1-201ENST00000429623 299 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AL133162.1-201ENST00000463228 453 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 RPL31P41-201ENST00000477967 372 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AC006517.1-201ENST00000480485 328 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 IGLV3-26-201ENST00000520756 302 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 IGKV1-22-201ENST00000524313 326 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AC025627.2-201ENST00000576220 160 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AC025946.2-201ENST00000603398 234 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 AC091167.4-201ENST00000605079 184 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 RNU6-94P-201ENST00000607728 107 ntBASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.88□□□□□ -1.79
RSPO4Q2I0M5 MAPK10-303ENST00000641324 3959 ntBASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 AC073073.2-201ENST00000609827 2578 ntBASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 DEFB108F-201ENST00000344638 222 ntBASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 SNORA38.1-201ENST00000364172 131 ntBASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 Y_RNA.244-201ENST00000364484 109 ntBASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 Z98749.2-208ENST00000381646 500 ntBASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 RNU6-1296P-201ENST00000383879 107 ntBASIC3.87□□□□□ -1.79
RSPO4Q2I0M5 Y_RNA.528-201ENST00000384575 108 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms