Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PCDH1Q08174 AC007496.3-201ENST00000624987 3443 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH1Q08174 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PCDH1Q08174 RNU4-15P-201ENST00000362613 141 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 U3.9-201ENST00000363823 204 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 RNU6-801P-201ENST00000364087 105 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 SNORD87-201ENST00000364849 89 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 RNU6-275P-201ENST00000364910 107 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 MIR147B-201ENST00000390185 80 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 RNU6-381P-201ENST00000391259 108 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 AL135790.2-201ENST00000437701 267 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 AC004386.2-201ENST00000441858 148 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 RPL23AP70-201ENST00000483361 460 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDH1Q08174 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDH1Q08174 Y_RNA.797-201ENST00000515977 94 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 SNORD116-25-201ENST00000516517 92 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 MIR5006-201ENST00000583027 110 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 AC244505.7-201ENST00000599675 272 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 AC068724.3-201ENST00000625906 87 ntBASIC3.83□□□□□ -1.8
PCDH1Q08174 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH1Q08174 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDH1Q08174 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH1Q08174 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH1Q08174 MAPK10-372ENST00000641954 3413 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDH1Q08174 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDH1Q08174 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PCDH1Q08174 SNORD115-30-201ENST00000364117 82 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 RNU6-198P-201ENST00000384258 104 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 MIR199A2-201ENST00000385289 110 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 SNORA57.1-201ENST00000391227 145 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 AL031003.1-201ENST00000404229 172 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 AC010099.1-201ENST00000455434 375 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 RNU7-23P-201ENST00000459465 62 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 AP002884.2-201ENST00000471647 395 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDH1Q08174 SNORA70.14-201ENST00000516205 110 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 RN7SKP21-201ENST00000516503 220 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDH1Q08174 DEFB131C-201ENST00000528817 165 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 AP000867.2-201ENST00000532468 320 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 AC007224.1-201ENST00000564410 144 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDH1Q08174 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 Y_RNA.778-201ENST00000620203 90 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDH1Q08174 AC112484.5-201ENST00000624189 228 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDH1Q08174 AC010889.1-201ENST00000566193 2666 ntBASIC3.82□□□□□ -1.8
PCDH1Q08174 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDH1Q08174 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDH1Q08174 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDH1Q08174 MIR423-201ENST00000362201 94 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 RNU6-151P-201ENST00000364158 107 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 SNORA18.2-201ENST00000383865 132 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 SNORA26.5-201ENST00000391215 123 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 RNA5SP504-201ENST00000410676 117 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 RNU2-37P-201ENST00000410695 177 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDH1Q08174 EBAG9P1-201ENST00000418955 543 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 AC145146.1-201ENST00000496370 254 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 RN7SKP164-201ENST00000516138 266 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 RNU6-313P-201ENST00000516317 112 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 RNU6-426P-201ENST00000516464 97 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 RNU1-117P-201ENST00000517041 158 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDH1Q08174 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.81□□□□□ -1.8
PCDH1Q08174 MIR3160-1-201ENST00000577972 85 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 MIR3684-201ENST00000579779 74 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 MIR6867-201ENST00000610636 67 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 AC013791.1-201ENST00000616619 62 ntBASIC3.81□□□□□ -1.8
PCDH1Q08174 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDH1Q08174 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
PCDH1Q08174 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDH1Q08174 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDH1Q08174 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDH1Q08174 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDH1Q08174 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDH1Q08174 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH1Q08174 AC010329.5-201ENST00000623497 2174 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH1Q08174 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH1Q08174 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDH1Q08174 RNU1-75P-201ENST00000347264 129 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 RNA5SP130-201ENST00000364431 114 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 Y_RNA.287-201ENST00000364853 94 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 RNU6-239P-201ENST00000390990 99 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 RNU6-1154P-201ENST00000391001 104 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 Y_RNA.586-201ENST00000391146 98 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 AC017083.1-201ENST00000428093 483 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 TOMM22P2-201ENST00000430735 237 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 CR769767.1-201ENST00000436337 346 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 AC091179.1-201ENST00000461606 579 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.8□□□□□ -1.8
PCDH1Q08174 RNA5SP143-201ENST00000516936 115 ntBASIC3.8□□□□□ -1.8
PCDH1Q08174 AC021269.2-201ENST00000532318 330 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms