Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.18□□□□□ -2.44
SCN7AQ01118 RNU4-48P-201ENST00000365559 182 ntBASIC-0.18□□□□□ -2.44
SCN7AQ01118 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.18□□□□□ -2.44
SCN7AQ01118 HMGN1P12-201ENST00000499125 195 ntBASIC-0.18□□□□□ -2.44
SCN7AQ01118 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.18□□□□□ -2.44
SCN7AQ01118 AC093027.1-201ENST00000546698 429 ntBASIC-0.18□□□□□ -2.44
SCN7AQ01118 AL391001.1-201ENST00000602747 715 ntBASIC-0.18□□□□□ -2.44
SCN7AQ01118 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.18□□□□□ -2.44
SCN7AQ01118 SNORA36.2-201ENST00000384004 127 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 RNU6-514P-201ENST00000384208 107 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 SNORD116-13-201ENST00000384408 92 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 VPS26BP1-201ENST00000417155 755 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 ELOCP30-201ENST00000447108 299 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 snoU13.25-201ENST00000458945 104 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.19□□□□□ -2.44
SCN7AQ01118 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.19□□□□□ -2.44
SCN7AQ01118 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.19□□□□□ -2.44
SCN7AQ01118 AC090888.2-201ENST00000559765 1144 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 AC011195.1-201ENST00000578177 177 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 BNIP3P26-201ENST00000600827 554 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 AC078795.2-201ENST00000602835 1252 ntBASIC-0.19□□□□□ -2.44
SCN7AQ01118 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.19□□□□□ -2.44
SCN7AQ01118 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.2□□□□□ -2.44
SCN7AQ01118 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.2□□□□□ -2.44
SCN7AQ01118 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.2□□□□□ -2.44
SCN7AQ01118 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.2□□□□□ -2.44
SCN7AQ01118 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.2□□□□□ -2.44
SCN7AQ01118 RPL39P39-201ENST00000455840 151 ntBASIC-0.2□□□□□ -2.44
SCN7AQ01118 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.2□□□□□ -2.44
SCN7AQ01118 HMGB1P30-201ENST00000492455 606 ntBASIC-0.2□□□□□ -2.44
SCN7AQ01118 AC069113.3-201ENST00000521019 150 ntBASIC-0.2□□□□□ -2.44
SCN7AQ01118 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.2□□□□□ -2.44
SCN7AQ01118 AC022523.2-201ENST00000561045 150 ntBASIC-0.2□□□□□ -2.44
SCN7AQ01118 AC073349.3-201ENST00000617616 186 ntBASIC-0.2□□□□□ -2.44
SCN7AQ01118 AC084824.4-201ENST00000620106 731 ntBASIC-0.2□□□□□ -2.44
SCN7AQ01118 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.2□□□□□ -2.44
SCN7AQ01118 MIR409-201ENST00000362237 79 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AL355796.1-201ENST00000406706 323 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 AL606517.1-201ENST00000446914 387 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 RNU6-863P-201ENST00000515989 104 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 MIR3136-201ENST00000583498 78 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 uc_338.6-201ENST00000613544 171 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 7SK.10-201ENST00000621414 298 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AL390237.1-201ENST00000404226 1415 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC107982.1-201ENST00000507171 1300 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 RNU6-30P-201ENST00000384561 107 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 SNORA16.2-201ENST00000390991 127 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 RNA5SP222-201ENST00000411039 105 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC027338.1-201ENST00000514840 825 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC008147.4-201ENST00000617570 1204 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 AP000676.3-201ENST00000623299 569 ntBASIC-0.21□□□□□ -2.44
SCN7AQ01118 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.21□□□□□ -2.44
SCN7AQ01118 MIR340-201ENST00000362125 95 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 RNA5SP264-201ENST00000363115 107 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 RNU6-839P-201ENST00000363347 108 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 RNU6-877P-201ENST00000383868 107 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 C1DP2-201ENST00000418167 426 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 AC013262.1-201ENST00000426710 252 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 MTND1P20-201ENST00000430341 950 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 C1DP4-201ENST00000455429 424 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 TMEM251P1-201ENST00000503717 318 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 AC109810.1-201ENST00000534066 224 ntBASIC-0.22□□□□□ -2.44
SCN7AQ01118 RNU6-833P-201ENST00000363486 107 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 RNA5SP496-201ENST00000391240 109 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.23□□□□□ -2.45
SCN7AQ01118 AC060773.1-201ENST00000421698 310 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 MTND4P24-201ENST00000424002 397 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 BX119904.4-201ENST00000424402 301 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 RPL23AP50-201ENST00000434149 455 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 COX7BP2-201ENST00000437976 242 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.23□□□□□ -2.45
SCN7AQ01118 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.23□□□□□ -2.45
SCN7AQ01118 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.23□□□□□ -2.45
SCN7AQ01118 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 SNORA31.19-201ENST00000517079 126 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 BNIP3P30-201ENST00000601184 574 ntBASIC-0.23□□□□□ -2.45
SCN7AQ01118 RNU6-97P-201ENST00000363387 104 ntBASIC-0.24□□□□□ -2.45
SCN7AQ01118 SNORD116-20-201ENST00000384529 92 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms