Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC005345.1-201ENST00000431868 217 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AC022364.2-201ENST00000457963 554 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC-0.1□□□□□ -2.43
HSPG2P98160 HMGB1P28-201ENST00000507778 552 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AC048346.1-201ENST00000510247 144 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.1□□□□□ -2.43
HSPG2P98160 AC095057.3-201ENST00000567102 1157 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AL162730.1-201ENST00000605734 292 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC008993.2-201ENST00000631744 806 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 MTND4P5-201ENST00000435821 1374 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6-359P-201ENST00000365466 108 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6-622P-201ENST00000384272 103 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AL133475.1-201ENST00000404414 305 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC011233.1-201ENST00000422812 283 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.1□□□□□ -2.43
HSPG2P98160 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AC073261.1-201ENST00000429409 121 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AL050341.1-201ENST00000447743 313 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RPL18AP17-201ENST00000455326 198 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 snoU13.8-201ENST00000458890 104 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 snoU13.14-201ENST00000459372 104 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.1□□□□□ -2.43
HSPG2P98160 MTND2P33-201ENST00000506452 1031 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC091874.1-201ENST00000511402 339 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC109810.1-201ENST00000534066 224 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 SNRPGP1-201ENST00000553864 222 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AL390237.1-201ENST00000404226 1415 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNY4P16-201ENST00000364768 94 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.1□□□□□ -2.43
HSPG2P98160 SNORA75.6-201ENST00000391318 127 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 RNU6-177P-201ENST00000411257 104 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 MTND1P21-201ENST00000412991 285 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 MTATP6P27-201ENST00000416987 621 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AC023194.1-201ENST00000493084 308 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.1□□□□□ -2.43
HSPG2P98160 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.1□□□□□ -2.43
HSPG2P98160 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.1□□□□□ -2.43
HSPG2P98160 SNORA25.12-201ENST00000516202 82 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 SUMO2P18-201ENST00000518873 252 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC024995.1-201ENST00000523014 93 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.1□□□□□ -2.43
HSPG2P98160 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC021231.3-201ENST00000558497 370 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 SNRPGP20-201ENST00000604477 205 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC121334.2-201ENST00000605387 271 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AL353149.1-201ENST00000610667 244 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AL136317.1-201ENST00000612653 226 ntBASIC-0.1□□□□□ -2.43
HSPG2P98160 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.1□□□□□ -2.43
HSPG2P98160 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
HSPG2P98160 MIR1185-1-201ENST00000408598 86 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 SNORD71-201ENST00000411292 86 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 RAC1P8-201ENST00000427086 527 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 MTND2P21-201ENST00000436242 1042 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 RNU7-159P-201ENST00000459284 62 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC104982.1-201ENST00000478775 574 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.11□□□□□ -2.43
HSPG2P98160 AC027338.1-201ENST00000514840 825 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.11□□□□□ -2.43
HSPG2P98160 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.11□□□□□ -2.43
HSPG2P98160 AC131055.1-201ENST00000584626 316 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AL121992.2-201ENST00000606262 256 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC063943.3-201ENST00000615562 356 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC009268.2-201ENST00000621925 457 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
HSPG2P98160 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 RNU4-63P-201ENST00000411313 118 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.11□□□□□ -2.43
HSPG2P98160 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.11□□□□□ -2.43
HSPG2P98160 RPL31P54-201ENST00000429803 370 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.11□□□□□ -2.43
HSPG2P98160 SEPT7P5-201ENST00000434048 306 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 SEPT7P4-201ENST00000437076 306 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 MTATP6P30-201ENST00000443540 664 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.11□□□□□ -2.43
HSPG2P98160 RPL37P6-201ENST00000460682 294 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.11□□□□□ -2.43
HSPG2P98160 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.11□□□□□ -2.43
HSPG2P98160 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
HSPG2P98160 SGO1P1-201ENST00000603525 1447 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 MIR103A1-201ENST00000362165 78 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 RNU6-815P-201ENST00000384080 113 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AL353777.1-201ENST00000425552 326 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms