Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RNU6-378P-201ENST00000384324 107 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 RNU6-906P-201ENST00000384700 70 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 Y_RNA.576-201ENST00000384781 102 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 RNU6-1176P-201ENST00000390955 107 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.74□□□□□ -2.29
AP1S1P61966 POLR2J4-204ENST00000418424 324 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 MED13P1-201ENST00000428342 171 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 AC244670.1-201ENST00000436879 112 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.74□□□□□ -2.29
AP1S1P61966 AC073910.1-201ENST00000445047 438 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.74□□□□□ -2.29
AP1S1P61966 AL009048.1-201ENST00000450437 298 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 RNU7-14P-201ENST00000459331 62 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.74□□□□□ -2.29
AP1S1P61966 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.74□□□□□ -2.29
AP1S1P61966 AC112204.1-201ENST00000502591 103 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 AC103851.1-201ENST00000506833 274 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 SCARNA16.2-201ENST00000516520 172 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.74□□□□□ -2.29
AP1S1P61966 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.74□□□□□ -2.29
AP1S1P61966 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.74□□□□□ -2.29
AP1S1P61966 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
AP1S1P61966 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.74□□□□□ -2.29
AP1S1P61966 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.74□□□□□ -2.29
AP1S1P61966 HMGN1P30-201ENST00000589286 268 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 RNU6-87P-201ENST00000607561 108 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 MIR6788-201ENST00000618842 66 ntBASIC0.74□□□□□ -2.29
AP1S1P61966 RNU1-96P-201ENST00000364163 162 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 Y_RNA.255-201ENST00000364581 97 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 RNU1-36P-201ENST00000365130 165 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 RNU6-116P-201ENST00000384042 109 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 RNA5SP247-201ENST00000411181 105 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 PIGFP2-201ENST00000421400 651 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.73□□□□□ -2.29
AP1S1P61966 RPS24P1-201ENST00000438550 371 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.73□□□□□ -2.29
AP1S1P61966 AC132479.1-201ENST00000449160 144 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 GAPDHP17-201ENST00000449858 1001 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AL133217.1-201ENST00000450980 425 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 SNRPGP9-201ENST00000456025 225 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC079140.3-201ENST00000511111 550 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC112206.4-201ENST00000515142 405 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.73□□□□□ -2.29
AP1S1P61966 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 RNA5SP384-201ENST00000516615 116 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC022616.3-201ENST00000523940 148 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AL442163.3-201ENST00000554110 156 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 MIR4509-3-201ENST00000578671 94 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 MIR4509-2-201ENST00000583920 94 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC078795.3-201ENST00000602913 472 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC018645.2-201ENST00000609151 472 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AL021879.1-201ENST00000611756 288 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 PCGEM1.1-201ENST00000613431 131 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 MIR4509-1-201ENST00000618224 94 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC126177.8-201ENST00000618339 1015 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 MIR8065-201ENST00000620577 100 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.73□□□□□ -2.29
AP1S1P61966 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.73□□□□□ -2.29
AP1S1P61966 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.73□□□□□ -2.29
AP1S1P61966 AL450472.1-202ENST00000637286 180 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC068647.2-201ENST00000637380 353 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC027514.1-201ENST00000588561 1603 ntBASIC0.73□□□□□ -2.29
AP1S1P61966 AC008163.1-202ENST00000636004 2889 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
AP1S1P61966 Y_RNA.18-201ENST00000362461 102 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 RNU5F-6P-201ENST00000362979 116 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 SNORD32A-201ENST00000364805 84 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 Y_RNA.324-201ENST00000365165 102 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 RPL21P1-201ENST00000399532 476 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 Y_RNA.608-201ENST00000410647 95 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 HIGD1AP15-201ENST00000416198 280 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 ARL5AP1-201ENST00000418991 388 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 ELOCP4-201ENST00000420090 333 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AC060773.1-201ENST00000421698 310 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 USP9YP14-201ENST00000430663 563 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 FTH1P12-201ENST00000432137 551 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AC084290.1-201ENST00000434995 374 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.72□□□□□ -2.29
AP1S1P61966 HSPE1P13-201ENST00000451143 297 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AC016925.1-201ENST00000458303 298 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AC007547.1-201ENST00000462177 490 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 MTCO2P29-201ENST00000465212 189 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AL163973.1-201ENST00000484753 577 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AC091874.1-201ENST00000511402 339 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AC074344.1-201ENST00000512823 224 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 RNU6-377P-201ENST00000515965 102 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 SCARNA24.1-201ENST00000516465 137 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AP001893.2-201ENST00000526949 202 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.72□□□□□ -2.29
AP1S1P61966 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.72□□□□□ -2.29
AP1S1P61966 MIR3136-201ENST00000583498 78 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 MIR151B-201ENST00000584249 96 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 MIR4999-201ENST00000585029 91 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AL031281.1-201ENST00000604049 488 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
AP1S1P61966 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 AC027335.2-201ENST00000624030 375 ntBASIC0.72□□□□□ -2.29
AP1S1P61966 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.72□□□□□ -2.29
AP1S1P61966 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms