Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.86□□□□□ -2.27
ACTBP60709 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.86□□□□□ -2.27
ACTBP60709 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.86□□□□□ -2.27
ACTBP60709 AC109446.1-201ENST00000566172 220 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AL590229.1-201ENST00000603497 542 ntBASIC0.86□□□□□ -2.27
ACTBP60709 CTHRC1P1-201ENST00000605383 469 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AC008945.2-201ENST00000606056 604 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AL021879.1-201ENST00000611756 288 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AC091304.9-201ENST00000612091 226 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AL450472.1-202ENST00000637286 180 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AC245060.5-201ENST00000610778 3293 ntBASIC0.86□□□□□ -2.27
ACTBP60709 MTND5P17-201ENST00000418405 1603 ntBASIC0.86□□□□□ -2.27
ACTBP60709 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
ACTBP60709 MTND4P14-201ENST00000435799 1354 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-37P-201ENST00000362692 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 U3.9-201ENST00000363823 204 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-11P-201ENST00000364234 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 Y_RNA.224-201ENST00000364308 111 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-169P-201ENST00000365336 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-438P-201ENST00000365561 103 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-25P-201ENST00000383873 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-1-201ENST00000383898 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-48P-201ENST00000384161 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-36P-201ENST00000384172 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-4P-201ENST00000384205 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-5P-201ENST00000384238 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-3P-201ENST00000384314 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-16P-201ENST00000384385 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-15P-201ENST00000384534 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-2-201ENST00000384627 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-29P-201ENST00000384637 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-9-201ENST00000384776 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-33P-201ENST00000384793 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 MIR620-201ENST00000385232 95 ntBASIC0.85□□□□□ -2.27
ACTBP60709 MTCO2P8-201ENST00000412213 658 ntBASIC0.85□□□□□ -2.27
ACTBP60709 HIGD1AP15-201ENST00000416198 280 ntBASIC0.85□□□□□ -2.27
ACTBP60709 ARL5AP1-201ENST00000418991 388 ntBASIC0.85□□□□□ -2.27
ACTBP60709 SNRPEP10-201ENST00000420249 274 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AL133396.1-201ENST00000432048 687 ntBASIC0.85□□□□□ -2.27
ACTBP60709 SNAP23P1-201ENST00000433229 246 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AL512286.1-201ENST00000439244 400 ntBASIC0.85□□□□□ -2.27
ACTBP60709 SNRPGP9-201ENST00000456025 225 ntBASIC0.85□□□□□ -2.27
ACTBP60709 COX6CP14-201ENST00000469580 174 ntBASIC0.85□□□□□ -2.27
ACTBP60709 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-856P-201ENST00000516959 98 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AC022878.1-201ENST00000530684 149 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AL512310.8-201ENST00000550183 120 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.85□□□□□ -2.27
ACTBP60709 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.85□□□□□ -2.27
ACTBP60709 MIR3923-201ENST00000579521 83 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AC008751.2-201ENST00000597885 980 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AL022345.2-201ENST00000606307 135 ntBASIC0.85□□□□□ -2.27
ACTBP60709 SNORD114-21-201ENST00000606412 72 ntBASIC0.85□□□□□ -2.27
ACTBP60709 RNU6-6P-201ENST00000606623 107 ntBASIC0.85□□□□□ -2.27
ACTBP60709 MIR3976-201ENST00000606807 139 ntBASIC0.85□□□□□ -2.27
ACTBP60709 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.85□□□□□ -2.27
ACTBP60709 AL353149.1-201ENST00000610667 244 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AC083806.3-201ENST00000614016 455 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AC009033.1-201ENST00000624279 431 ntBASIC0.85□□□□□ -2.27
ACTBP60709 AC010608.3-201ENST00000625048 527 ntBASIC0.85□□□□□ -2.27
ACTBP60709 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
ACTBP60709 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
ACTBP60709 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.84□□□□□ -2.27
ACTBP60709 AC092268.1-201ENST00000342691 405 ntBASIC0.84□□□□□ -2.27
ACTBP60709 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
ACTBP60709 RNU6-53P-201ENST00000365367 106 ntBASIC0.84□□□□□ -2.27
ACTBP60709 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
ACTBP60709 RNU6-550P-201ENST00000391057 101 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AL117339.3-201ENST00000418733 162 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AC098592.1-201ENST00000419352 333 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AC013410.2-201ENST00000422627 201 ntBASIC0.84□□□□□ -2.27
ACTBP60709 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.84□□□□□ -2.27
ACTBP60709 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.84□□□□□ -2.27
ACTBP60709 AC007395.1-201ENST00000451333 677 ntBASIC0.84□□□□□ -2.27
ACTBP60709 RNA5SP102-201ENST00000516865 106 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AC090572.1-201ENST00000519251 160 ntBASIC0.84□□□□□ -2.27
ACTBP60709 ZNF321P-202ENST00000550843 495 ntBASIC0.84□□□□□ -2.27
ACTBP60709 EIF4A1P12-201ENST00000551910 141 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AC078795.3-201ENST00000602913 472 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AC112191.3-201ENST00000604371 277 ntBASIC0.84□□□□□ -2.27
ACTBP60709 RPL17P51-201ENST00000605218 238 ntBASIC0.84□□□□□ -2.27
ACTBP60709 BX284668.6-201ENST00000606899 438 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AC005520.5-201ENST00000613926 164 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AC136475.10-201ENST00000620253 385 ntBASIC0.84□□□□□ -2.27
ACTBP60709 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
ACTBP60709 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.83□□□□□ -2.28
ACTBP60709 RNU6-428P-201ENST00000362942 107 ntBASIC0.83□□□□□ -2.28
ACTBP60709 RNU4-56P-201ENST00000364700 142 ntBASIC0.83□□□□□ -2.28
ACTBP60709 SNORA25-201ENST00000384384 134 ntBASIC0.83□□□□□ -2.28
ACTBP60709 AC106883.1-201ENST00000418805 562 ntBASIC0.83□□□□□ -2.28
ACTBP60709 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
ACTBP60709 AC069257.2-201ENST00000441819 155 ntBASIC0.83□□□□□ -2.28
ACTBP60709 HSPE1P13-201ENST00000451143 297 ntBASIC0.83□□□□□ -2.28
ACTBP60709 snoU13.27-201ENST00000459278 104 ntBASIC0.83□□□□□ -2.28
ACTBP60709 MTCO2P6-201ENST00000463134 685 ntBASIC0.83□□□□□ -2.28
ACTBP60709 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.83□□□□□ -2.28
ACTBP60709 AP003072.2-201ENST00000527756 676 ntBASIC0.83□□□□□ -2.28
ACTBP60709 MTND1P8-201ENST00000571424 950 ntBASIC0.83□□□□□ -2.28
ACTBP60709 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.83□□□□□ -2.28
ACTBP60709 MIR7844-201ENST00000616161 122 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms