Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.72□□□□□ -1.81
ERVFC1P60507 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.72□□□□□ -1.81
ERVFC1P60507 AC055872.1-201ENST00000570978 278 ntBASIC3.72□□□□□ -1.81
ERVFC1P60507 MIR5680-201ENST00000577577 84 ntBASIC3.72□□□□□ -1.81
ERVFC1P60507 AL137843.1-201ENST00000605078 385 ntBASIC3.72□□□□□ -1.81
ERVFC1P60507 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.72□□□□□ -1.81
ERVFC1P60507 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.72□□□□□ -1.81
ERVFC1P60507 AP003355.3-201ENST00000623465 114 ntBASIC3.72□□□□□ -1.81
ERVFC1P60507 AC091895.1-201ENST00000624494 256 ntBASIC3.72□□□□□ -1.81
ERVFC1P60507 snoU18.1-201ENST00000629629 71 ntBASIC3.72□□□□□ -1.81
ERVFC1P60507 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ERVFC1P60507 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ERVFC1P60507 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ERVFC1P60507 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
ERVFC1P60507 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ERVFC1P60507 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ERVFC1P60507 Y_RNA.7-201ENST00000362352 102 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 Y_RNA.75-201ENST00000362927 97 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 RNU6-778P-201ENST00000363269 103 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 Y_RNA.121-201ENST00000363309 113 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 RNU4-84P-201ENST00000364200 139 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 RNU6-1141P-201ENST00000364520 107 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 Y_RNA.595-201ENST00000410403 105 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 Z75741.1-201ENST00000446793 314 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.71□□□□□ -1.82
ERVFC1P60507 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.71□□□□□ -1.82
ERVFC1P60507 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 AL357075.2-201ENST00000614906 189 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 MIR6134-201ENST00000617606 109 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
ERVFC1P60507 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ERVFC1P60507 OTUD4P1-201ENST00000237841 3067 ntBASIC3.71□□□□□ -1.82
ERVFC1P60507 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ERVFC1P60507 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ERVFC1P60507 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ERVFC1P60507 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ERVFC1P60507 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
ERVFC1P60507 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ERVFC1P60507 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
ERVFC1P60507 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.7□□□□□ -1.82
ERVFC1P60507 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.7□□□□□ -1.82
ERVFC1P60507 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ERVFC1P60507 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ERVFC1P60507 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ERVFC1P60507 Y_RNA.215-201ENST00000364204 112 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 SNORD116-20-201ENST00000384529 92 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 AC074117.2-201ENST00000417130 397 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AC078809.1-201ENST00000427601 140 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AC016632.1-201ENST00000503994 196 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.7□□□□□ -1.82
ERVFC1P60507 FTX_3.1-201ENST00000610451 147 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 AC010999.1-201ENST00000611856 324 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 MIR6852-201ENST00000621699 66 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.7□□□□□ -1.82
ERVFC1P60507 AC093908.1-201ENST00000623125 8092 ntBASIC3.7□□□□□ -1.82
ERVFC1P60507 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
ERVFC1P60507 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ERVFC1P60507 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ERVFC1P60507 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.7□□□□□ -1.82
ERVFC1P60507 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ERVFC1P60507 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
ERVFC1P60507 SRP72P2-201ENST00000344851 1979 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
ERVFC1P60507 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
ERVFC1P60507 Y_RNA.238-201ENST00000364441 102 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 RNU6-898P-201ENST00000365627 104 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 RNU6-217P-201ENST00000384164 104 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 MIR487A-201ENST00000385009 80 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 RPL26P27-201ENST00000414397 437 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.69□□□□□ -1.82
ERVFC1P60507 AC112220.1-201ENST00000434628 355 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 AC010095.1-201ENST00000443543 144 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 RPS4XP22-201ENST00000480755 780 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.69□□□□□ -1.82
ERVFC1P60507 HMGB3P3-201ENST00000510526 400 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 RNU6-1282P-201ENST00000516735 96 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 MIR4325-201ENST00000583049 90 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 AC019159.1-201ENST00000605094 187 ntBASIC3.69□□□□□ -1.82
ERVFC1P60507 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ERVFC1P60507 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ERVFC1P60507 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.69□□□□□ -1.82
ERVFC1P60507 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ERVFC1P60507 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
ERVFC1P60507 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ERVFC1P60507 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.68□□□□□ -1.82
ERVFC1P60507 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.68□□□□□ -1.82
ERVFC1P60507 FTLP6-201ENST00000355274 422 ntBASIC3.68□□□□□ -1.82
ERVFC1P60507 SNORA26.3-201ENST00000391119 136 ntBASIC3.68□□□□□ -1.82
ERVFC1P60507 U3.26-201ENST00000391236 204 ntBASIC3.68□□□□□ -1.82
ERVFC1P60507 AP000567.1-201ENST00000406413 156 ntBASIC3.68□□□□□ -1.82
ERVFC1P60507 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms