Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AF235103.2-201ENST00000525753 346 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AP005639.2-201ENST00000527592 928 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.83□□□□□ -1.96
RHBDL3P58872 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.83□□□□□ -1.96
RHBDL3P58872 MIR3672-201ENST00000584290 82 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AL022345.1-201ENST00000607292 135 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.83□□□□□ -1.96
RHBDL3P58872 AC067747.1-201ENST00000608026 250 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 AC012640.5-201ENST00000623897 319 ntBASIC2.83□□□□□ -1.96
RHBDL3P58872 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
RHBDL3P58872 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.83□□□□□ -1.96
RHBDL3P58872 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RHBDL3P58872 SNORD116-11-201ENST00000383882 92 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 RNU6-784P-201ENST00000384330 106 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 RNU6-95P-201ENST00000384697 107 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 RNA5SP425-201ENST00000410336 112 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 AL139396.1-201ENST00000421137 167 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 AC018634.1-201ENST00000437554 401 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 MTATP6P13-201ENST00000438531 667 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 snoU13.15-201ENST00000459407 104 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 RPS27AP9-201ENST00000477681 438 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.82□□□□□ -1.96
RHBDL3P58872 PTP4A1P4-201ENST00000512479 322 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 ACA59.1-201ENST00000515966 143 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 SNORA31.25-201ENST00000517242 134 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.82□□□□□ -1.96
RHBDL3P58872 AC109446.1-201ENST00000566172 220 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 RPS3AP23-202ENST00000574601 686 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.82□□□□□ -1.96
RHBDL3P58872 AC018638.8-201ENST00000588755 281 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.82□□□□□ -1.96
RHBDL3P58872 BNIP3P10-201ENST00000605360 577 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 AC084782.3-201ENST00000612282 578 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 MIR6895-201ENST00000613497 78 ntBASIC2.82□□□□□ -1.96
RHBDL3P58872 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RHBDL3P58872 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.81□□□□□ -1.96
RHBDL3P58872 RNA5SP432-201ENST00000362480 116 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 SNORA41-201ENST00000384675 132 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 HMGN2P39-201ENST00000398005 273 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 AL135786.1-201ENST00000415892 214 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.81□□□□□ -1.96
RHBDL3P58872 AL356320.1-201ENST00000429616 163 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.81□□□□□ -1.96
RHBDL3P58872 RNU7-187P-201ENST00000458985 68 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 MTND4LP26-201ENST00000518144 282 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.81□□□□□ -1.96
RHBDL3P58872 AC233702.2-202ENST00000562547 291 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 MIR5007-201ENST00000583098 95 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 POLR3GP2-201ENST00000588366 668 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 AC007229.1-201ENST00000590455 412 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 AC124303.1-201ENST00000605703 360 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 MIR6840-201ENST00000611937 71 ntBASIC2.81□□□□□ -1.96
RHBDL3P58872 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
RHBDL3P58872 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
RHBDL3P58872 RNU6-234P-201ENST00000365229 104 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 SNORD14D-201ENST00000384390 87 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RHBDL3P58872 RNA5SP494-201ENST00000410653 129 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 RPS26P42-201ENST00000413485 326 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.8□□□□□ -1.96
RHBDL3P58872 snoU13.26-201ENST00000459452 105 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 AC004486.1-201ENST00000546846 233 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.8□□□□□ -1.96
RHBDL3P58872 MIR1273D-201ENST00000577266 86 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 AC019193.3-201ENST00000609144 554 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.8□□□□□ -1.96
RHBDL3P58872 AL359757.2-201ENST00000624309 274 ntBASIC2.8□□□□□ -1.96
RHBDL3P58872 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RHBDL3P58872 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RHBDL3P58872 Y_RNA.72-201ENST00000362894 103 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 Y_RNA.99-201ENST00000363138 105 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 RNU6-743P-201ENST00000364151 106 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 U8.8-201ENST00000365399 135 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 SNORA32.2-201ENST00000384049 122 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 SNORA29-201ENST00000384183 140 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 AL355497.1-201ENST00000406262 551 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 Y_RNA.599-201ENST00000410489 109 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.79□□□□□ -1.96
RHBDL3P58872 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.79□□□□□ -1.96
RHBDL3P58872 MIR4648-201ENST00000580107 72 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 AC060780.3-201ENST00000589464 80 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 AC009994.1-201ENST00000606889 253 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 AL359697.1-201ENST00000624879 587 ntBASIC2.79□□□□□ -1.96
RHBDL3P58872 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RHBDL3P58872 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
RHBDL3P58872 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RHBDL3P58872 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.79□□□□□ -1.96
RHBDL3P58872 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RHBDL3P58872 MIR21-201ENST00000362134 72 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 SNORA36A-201ENST00000384221 132 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 RNU6-831P-201ENST00000384548 107 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 SNORA12-201ENST00000391162 147 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 RNU6-1093P-201ENST00000391194 107 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.78□□□□□ -1.96
RHBDL3P58872 NFU1P2-201ENST00000448700 469 ntBASIC2.78□□□□□ -1.96
RHBDL3P58872 AL353705.4-201ENST00000449661 238 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms