Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
GFRA1P56159 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.34□□□□□ -1.88
GFRA1P56159 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.34□□□□□ -1.88
GFRA1P56159 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.88
GFRA1P56159 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GFRA1P56159 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
GFRA1P56159 AC092593.1-201ENST00000515413 1815 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 Y_RNA.136-201ENST00000363444 102 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 CD24P4-201ENST00000382840 243 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 RNU6-1264P-201ENST00000383891 107 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 Y_RNA.446-201ENST00000384178 104 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.33□□□□□ -1.88
GFRA1P56159 MIR1298-201ENST00000408783 112 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 ATP5A1P2-201ENST00000412323 255 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.33□□□□□ -1.88
GFRA1P56159 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.33□□□□□ -1.88
GFRA1P56159 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.33□□□□□ -1.88
GFRA1P56159 MRPS10P1-201ENST00000448483 130 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 NDUFB4P10-201ENST00000452541 359 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 SCARNA17.1-201ENST00000516211 143 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 SCARNA17.2-201ENST00000516334 143 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 RNU2-44P-201ENST00000516795 194 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 RNU1-117P-201ENST00000517041 158 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 SCARNA11.3-201ENST00000517276 130 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.33□□□□□ -1.88
GFRA1P56159 AC022080.3-201ENST00000544433 482 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.33□□□□□ -1.88
GFRA1P56159 AL162424.1-201ENST00000602325 221 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 RPL17P51-201ENST00000605218 238 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 AC107294.3-201ENST00000609211 526 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 AC098479.1-201ENST00000609225 154 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 SCARNA17.4-201ENST00000614296 143 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 AC002064.3-201ENST00000623448 346 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 AC090517.3-201ENST00000625170 141 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 AC068205.3-201ENST00000636385 468 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 AP000553.6-201ENST00000641242 118 ntBASIC3.33□□□□□ -1.88
GFRA1P56159 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.33□□□□□ -1.88
GFRA1P56159 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GFRA1P56159 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
GFRA1P56159 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GFRA1P56159 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
GFRA1P56159 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
GFRA1P56159 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.32□□□□□ -1.88
GFRA1P56159 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GFRA1P56159 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
GFRA1P56159 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GFRA1P56159 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
GFRA1P56159 Y_RNA.297-201ENST00000364950 91 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 RNU6-209P-201ENST00000384118 107 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 MIR23B-201ENST00000384832 97 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 MIR449B-201ENST00000384995 97 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 SNORA12-201ENST00000391162 147 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 AL138878.1-201ENST00000405131 347 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 RPL19P1-201ENST00000411635 428 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.32□□□□□ -1.88
GFRA1P56159 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.32□□□□□ -1.88
GFRA1P56159 RNU6-155P-201ENST00000516347 100 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 RN7SKP209-201ENST00000516888 304 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 SNORA81.3-201ENST00000517283 198 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.32□□□□□ -1.88
GFRA1P56159 DEFB131C-201ENST00000528817 165 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.32□□□□□ -1.88
GFRA1P56159 MIR4643-201ENST00000577473 78 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 AC006380.1-201ENST00000603598 186 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GFRA1P56159 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.32□□□□□ -1.88
GFRA1P56159 AL034408.1-202ENST00000636088 415 ntBASIC3.32□□□□□ -1.88
GFRA1P56159 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GFRA1P56159 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
GFRA1P56159 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GFRA1P56159 Y_RNA.29-201ENST00000362570 113 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 Y_RNA.101-201ENST00000363154 102 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 Y_RNA.275-201ENST00000364726 110 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 RNU6-740P-201ENST00000364734 105 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 HMGN2P8-201ENST00000391458 268 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 AC004866.1-201ENST00000411748 78 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 AL139156.1-201ENST00000412785 841 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.31□□□□□ -1.88
GFRA1P56159 MTCO1P5-201ENST00000433573 344 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.31□□□□□ -1.88
GFRA1P56159 AL138752.1-201ENST00000452964 351 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.31□□□□□ -1.88
GFRA1P56159 AC091959.1-201ENST00000495857 238 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.31□□□□□ -1.88
GFRA1P56159 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.31□□□□□ -1.88
GFRA1P56159 RN7SKP18-201ENST00000516005 275 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 AL512605.2-201ENST00000592972 256 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 AL109918.3-201ENST00000603072 338 ntBASIC3.31□□□□□ -1.88
GFRA1P56159 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GFRA1P56159 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
GFRA1P56159 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.31□□□□□ -1.88
GFRA1P56159 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
GFRA1P56159 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.3□□□□□ -1.88
GFRA1P56159 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA1P56159 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA1P56159 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GFRA1P56159 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.3□□□□□ -1.88
GFRA1P56159 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms