Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC023510.2-201ENST00000622162 746 ntBASIC1.38□□□□□ -2.19
CDH6P55285 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CDH6P55285 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH6P55285 MTND4P14-201ENST00000435799 1354 ntBASIC1.37□□□□□ -2.19
CDH6P55285 RNU6-266P-201ENST00000364225 107 ntBASIC1.37□□□□□ -2.19
CDH6P55285 SNORD32A-201ENST00000364805 84 ntBASIC1.37□□□□□ -2.19
CDH6P55285 RNU6-827P-201ENST00000365553 106 ntBASIC1.37□□□□□ -2.19
CDH6P55285 SNORA32.2-201ENST00000384049 122 ntBASIC1.37□□□□□ -2.19
CDH6P55285 SNORA26.3-201ENST00000391119 136 ntBASIC1.37□□□□□ -2.19
CDH6P55285 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.37□□□□□ -2.19
CDH6P55285 MIR1267-201ENST00000408723 78 ntBASIC1.37□□□□□ -2.19
CDH6P55285 RPL21P111-201ENST00000418453 477 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AL117339.3-201ENST00000418733 162 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AC139712.2-201ENST00000424302 339 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AL133396.1-201ENST00000432048 687 ntBASIC1.37□□□□□ -2.19
CDH6P55285 UBE2V1P8-201ENST00000437166 265 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH6P55285 SNRPEP8-201ENST00000442866 260 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AC244505.5-201ENST00000443639 207 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AC022364.2-201ENST00000457963 554 ntBASIC1.37□□□□□ -2.19
CDH6P55285 SCARNA18-201ENST00000459004 134 ntBASIC1.37□□□□□ -2.19
CDH6P55285 RNA5SP269-201ENST00000459032 137 ntBASIC1.37□□□□□ -2.19
CDH6P55285 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH6P55285 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.37□□□□□ -2.19
CDH6P55285 AC098862.1-201ENST00000504991 413 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AK3P2-201ENST00000507976 429 ntBASIC1.37□□□□□ -2.19
CDH6P55285 ATP5EP1-201ENST00000510257 156 ntBASIC1.37□□□□□ -2.19
CDH6P55285 SNORA25.17-201ENST00000517184 124 ntBASIC1.37□□□□□ -2.19
CDH6P55285 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.37□□□□□ -2.19
CDH6P55285 LRRC34P1-201ENST00000542742 915 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.37□□□□□ -2.19
CDH6P55285 AC103996.1-201ENST00000555468 102 ntBASIC1.37□□□□□ -2.19
CDH6P55285 SUB1P2-201ENST00000556401 297 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.37□□□□□ -2.19
CDH6P55285 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH6P55285 MIR4421-201ENST00000578133 69 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.37□□□□□ -2.19
CDH6P55285 RSL24D1P11-201ENST00000591045 491 ntBASIC1.37□□□□□ -2.19
CDH6P55285 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.37□□□□□ -2.19
CDH6P55285 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.37□□□□□ -2.19
CDH6P55285 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.37□□□□□ -2.19
CDH6P55285 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.37□□□□□ -2.19
CDH6P55285 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CDH6P55285 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
CDH6P55285 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDH6P55285 MIR340-201ENST00000362125 95 ntBASIC1.36□□□□□ -2.19
CDH6P55285 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
CDH6P55285 RNU6-296P-201ENST00000384608 107 ntBASIC1.36□□□□□ -2.19
CDH6P55285 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.36□□□□□ -2.19
CDH6P55285 MTCO2P34-201ENST00000421994 607 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.36□□□□□ -2.19
CDH6P55285 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.36□□□□□ -2.19
CDH6P55285 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.36□□□□□ -2.19
CDH6P55285 AL358934.1-201ENST00000432346 324 ntBASIC1.36□□□□□ -2.19
CDH6P55285 SNAP23P1-201ENST00000433229 246 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.36□□□□□ -2.19
CDH6P55285 RPS27AP8-201ENST00000452665 445 ntBASIC1.36□□□□□ -2.19
CDH6P55285 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
CDH6P55285 GMFBP1-201ENST00000467831 427 ntBASIC1.36□□□□□ -2.19
CDH6P55285 MTND3P7-201ENST00000474435 343 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.36□□□□□ -2.19
CDH6P55285 AC016632.1-201ENST00000503994 196 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.36□□□□□ -2.19
CDH6P55285 SNORD60.2-201ENST00000516883 86 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AP003034.1-201ENST00000534621 422 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.36□□□□□ -2.19
CDH6P55285 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.36□□□□□ -2.19
CDH6P55285 AP000942.3-201ENST00000603702 160 ntBASIC1.36□□□□□ -2.19
CDH6P55285 PCGEM1.1-201ENST00000613431 131 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AL359757.2-201ENST00000624309 274 ntBASIC1.36□□□□□ -2.19
CDH6P55285 AC009161.2-201ENST00000624626 138 ntBASIC1.36□□□□□ -2.19
CDH6P55285 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CDH6P55285 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDH6P55285 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
CDH6P55285 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH6P55285 RPL30P13-201ENST00000418873 348 ntBASIC1.35□□□□□ -2.19
CDH6P55285 EBAG9P1-201ENST00000418955 543 ntBASIC1.35□□□□□ -2.19
CDH6P55285 PIGFP2-201ENST00000421400 651 ntBASIC1.35□□□□□ -2.19
CDH6P55285 RPL23AP95-201ENST00000426806 265 ntBASIC1.35□□□□□ -2.19
CDH6P55285 AC245517.4-201ENST00000448601 281 ntBASIC1.35□□□□□ -2.19
CDH6P55285 MTND1P27-201ENST00000451117 902 ntBASIC1.35□□□□□ -2.19
CDH6P55285 AC009474.2-201ENST00000451383 136 ntBASIC1.35□□□□□ -2.19
CDH6P55285 C1DP4-201ENST00000455429 424 ntBASIC1.35□□□□□ -2.19
CDH6P55285 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.35□□□□□ -2.19
CDH6P55285 AC010486.2-201ENST00000505572 483 ntBASIC1.35□□□□□ -2.19
CDH6P55285 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH6P55285 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH6P55285 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.35□□□□□ -2.19
CDH6P55285 SUB1P3-201ENST00000564581 315 ntBASIC1.35□□□□□ -2.19
CDH6P55285 AGGF1P4-201ENST00000568249 801 ntBASIC1.35□□□□□ -2.19
CDH6P55285 MIR4769-201ENST00000584126 77 ntBASIC1.35□□□□□ -2.19
CDH6P55285 AC078795.3-201ENST00000602913 472 ntBASIC1.35□□□□□ -2.19
CDH6P55285 AC025449.1-201ENST00000603896 529 ntBASIC1.35□□□□□ -2.19
CDH6P55285 Z94722.1-201ENST00000604328 474 ntBASIC1.35□□□□□ -2.19
CDH6P55285 RPL17P51-201ENST00000605218 238 ntBASIC1.35□□□□□ -2.19
CDH6P55285 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDH6P55285 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
CDH6P55285 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms