Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
GPC3P51654 RNU6-37P-201ENST00000362692 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 Y_RNA.140-201ENST00000363474 103 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-105P-201ENST00000363909 104 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-11P-201ENST00000364234 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-1164P-201ENST00000364428 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-25P-201ENST00000383873 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 SNORA69-201ENST00000383895 132 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-1-201ENST00000383898 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-48P-201ENST00000384161 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-36P-201ENST00000384172 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-4P-201ENST00000384205 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-5P-201ENST00000384238 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-3P-201ENST00000384314 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-16P-201ENST00000384385 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-15P-201ENST00000384534 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-2-201ENST00000384627 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-29P-201ENST00000384637 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-9-201ENST00000384776 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-33P-201ENST00000384793 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
GPC3P51654 VN1R36P-201ENST00000414936 291 ntBASIC1.9□□□□□ -2.11
GPC3P51654 SEPT14P3-201ENST00000439401 183 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.9□□□□□ -2.11
GPC3P51654 AL732372.2-207ENST00000445840 183 ntBASIC1.9□□□□□ -2.11
GPC3P51654 SEPT14P2-201ENST00000453405 183 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.9□□□□□ -2.11
GPC3P51654 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.9□□□□□ -2.11
GPC3P51654 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.9□□□□□ -2.11
GPC3P51654 SEPT14P4-201ENST00000513445 186 ntBASIC1.9□□□□□ -2.11
GPC3P51654 SNORD60.2-201ENST00000516883 86 ntBASIC1.9□□□□□ -2.11
GPC3P51654 SNORA44.1-201ENST00000517031 108 ntBASIC1.9□□□□□ -2.11
GPC3P51654 FO082796.1-201ENST00000523795 183 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.9□□□□□ -2.11
GPC3P51654 AC022880.1-201ENST00000534017 973 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AL512360.1-201ENST00000555346 234 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.9□□□□□ -2.11
GPC3P51654 MIR3122-201ENST00000577243 73 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.9□□□□□ -2.11
GPC3P51654 MIR4424-201ENST00000585257 86 ntBASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-6P-201ENST00000606623 107 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AC093783.1-201ENST00000612976 329 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AC130454.1-201ENST00000622948 401 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.9□□□□□ -2.11
GPC3P51654 AC099654.12-201ENST00000639868 649 ntBASIC1.9□□□□□ -2.11
GPC3P51654 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.9□□□□□ -2.11
GPC3P51654 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.9□□□□□ -2.11
GPC3P51654 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
GPC3P51654 RNU6-1303P-201ENST00000364841 107 ntBASIC1.89□□□□□ -2.11
GPC3P51654 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
GPC3P51654 RNU6-160P-201ENST00000384591 107 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AC016907.1-201ENST00000419483 435 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.89□□□□□ -2.11
GPC3P51654 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
GPC3P51654 AC108667.1-201ENST00000428618 249 ntBASIC1.89□□□□□ -2.11
GPC3P51654 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.89□□□□□ -2.11
GPC3P51654 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.89□□□□□ -2.11
GPC3P51654 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.89□□□□□ -2.11
GPC3P51654 AC013470.1-201ENST00000453438 462 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AC132942.1-201ENST00000486753 483 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AC022447.4-201ENST00000504053 364 ntBASIC1.89□□□□□ -2.11
GPC3P51654 RNU6-189P-201ENST00000516120 101 ntBASIC1.89□□□□□ -2.11
GPC3P51654 RNU6-506P-201ENST00000516553 94 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.89□□□□□ -2.11
GPC3P51654 AC090115.3-201ENST00000553218 849 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.89□□□□□ -2.11
GPC3P51654 HMGB1P33-201ENST00000563485 527 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.89□□□□□ -2.11
GPC3P51654 AL162413.1-201ENST00000603198 110 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AC002044.1-201ENST00000606707 158 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AC064807.4-201ENST00000607201 407 ntBASIC1.89□□□□□ -2.11
GPC3P51654 AC097372.5-201ENST00000623665 376 ntBASIC1.89□□□□□ -2.11
GPC3P51654 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
GPC3P51654 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
GPC3P51654 RNU6-23P-201ENST00000363283 107 ntBASIC1.88□□□□□ -2.11
GPC3P51654 MIR181A1-201ENST00000385026 110 ntBASIC1.88□□□□□ -2.11
GPC3P51654 RNA5SP501-201ENST00000410990 112 ntBASIC1.88□□□□□ -2.11
GPC3P51654 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.88□□□□□ -2.11
GPC3P51654 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.88□□□□□ -2.11
GPC3P51654 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.88□□□□□ -2.11
GPC3P51654 RNU7-138P-201ENST00000459479 64 ntBASIC1.88□□□□□ -2.11
GPC3P51654 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.88□□□□□ -2.11
GPC3P51654 AC009646.1-201ENST00000510455 318 ntBASIC1.88□□□□□ -2.11
GPC3P51654 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
GPC3P51654 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.88□□□□□ -2.11
GPC3P51654 RNU5F-2P-201ENST00000516066 82 ntBASIC1.88□□□□□ -2.11
GPC3P51654 SNORA14.1-201ENST00000516113 141 ntBASIC1.88□□□□□ -2.11
GPC3P51654 CENPUP1-201ENST00000526649 1202 ntBASIC1.88□□□□□ -2.11
GPC3P51654 ZNF519P2-201ENST00000557032 169 ntBASIC1.88□□□□□ -2.11
GPC3P51654 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.88□□□□□ -2.11
GPC3P51654 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
GPC3P51654 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
GPC3P51654 CBX3P1-201ENST00000325243 554 ntBASIC1.87□□□□□ -2.11
GPC3P51654 RNU4-56P-201ENST00000364700 142 ntBASIC1.87□□□□□ -2.11
GPC3P51654 RNU4-66P-201ENST00000365199 138 ntBASIC1.87□□□□□ -2.11
GPC3P51654 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.87□□□□□ -2.11
GPC3P51654 Y_RNA.409-201ENST00000383990 98 ntBASIC1.87□□□□□ -2.11
GPC3P51654 RPS29P13-201ENST00000402041 169 ntBASIC1.87□□□□□ -2.11
GPC3P51654 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.87□□□□□ -2.11
GPC3P51654 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms