Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 RNU2-44P-201ENST00000516795 194 ntBASIC3.18□□□□□ -1.9
MECP2P51608 SCARNA3-201ENST00000517097 143 ntBASIC3.18□□□□□ -1.9
MECP2P51608 DEFB108E-201ENST00000524692 240 ntBASIC3.18□□□□□ -1.9
MECP2P51608 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.18□□□□□ -1.9
MECP2P51608 AC007224.1-201ENST00000564410 144 ntBASIC3.18□□□□□ -1.9
MECP2P51608 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.18□□□□□ -1.9
MECP2P51608 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.18□□□□□ -1.9
MECP2P51608 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.18□□□□□ -1.9
MECP2P51608 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.18□□□□□ -1.9
MECP2P51608 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
MECP2P51608 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.18□□□□□ -1.9
MECP2P51608 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.17□□□□□ -1.9
MECP2P51608 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MECP2P51608 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.17□□□□□ -1.9
MECP2P51608 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
MECP2P51608 RNU6-961P-201ENST00000363893 105 ntBASIC3.17□□□□□ -1.9
MECP2P51608 Y_RNA.237-201ENST00000364439 102 ntBASIC3.17□□□□□ -1.9
MECP2P51608 RNU6-290P-201ENST00000365212 101 ntBASIC3.17□□□□□ -1.9
MECP2P51608 Y_RNA.562-201ENST00000384695 113 ntBASIC3.17□□□□□ -1.9
MECP2P51608 AL356095.1-201ENST00000417217 199 ntBASIC3.17□□□□□ -1.9
MECP2P51608 AC139712.2-201ENST00000424302 339 ntBASIC3.17□□□□□ -1.9
MECP2P51608 MTND4LP30-201ENST00000454092 297 ntBASIC3.17□□□□□ -1.9
MECP2P51608 RAC1P2-201ENST00000511164 579 ntBASIC3.17□□□□□ -1.9
MECP2P51608 RNU6-1023P-201ENST00000516137 106 ntBASIC3.17□□□□□ -1.9
MECP2P51608 RNU6-1338P-201ENST00000516328 91 ntBASIC3.17□□□□□ -1.9
MECP2P51608 RNU6-107P-201ENST00000516643 102 ntBASIC3.17□□□□□ -1.9
MECP2P51608 RNU6-388P-201ENST00000517012 105 ntBASIC3.17□□□□□ -1.9
MECP2P51608 RNU6-389P-201ENST00000517048 105 ntBASIC3.17□□□□□ -1.9
MECP2P51608 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.17□□□□□ -1.9
MECP2P51608 MIR3128-201ENST00000581957 66 ntBASIC3.17□□□□□ -1.9
MECP2P51608 MIR3199-1-201ENST00000582434 88 ntBASIC3.17□□□□□ -1.9
MECP2P51608 AC005357.1-201ENST00000588399 301 ntBASIC3.17□□□□□ -1.9
MECP2P51608 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.17□□□□□ -1.9
MECP2P51608 AP001282.2-201ENST00000616149 309 ntBASIC3.17□□□□□ -1.9
MECP2P51608 AC006001.4-201ENST00000622243 395 ntBASIC3.17□□□□□ -1.9
MECP2P51608 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MECP2P51608 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.16□□□□□ -1.9
MECP2P51608 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.16□□□□□ -1.9
MECP2P51608 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
MECP2P51608 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
MECP2P51608 MIR30E-201ENST00000362104 92 ntBASIC3.16□□□□□ -1.9
MECP2P51608 SNORA73.2-201ENST00000364946 201 ntBASIC3.16□□□□□ -1.9
MECP2P51608 RNU6-1175P-201ENST00000365200 107 ntBASIC3.16□□□□□ -1.9
MECP2P51608 U6atac.2-201ENST00000408644 118 ntBASIC3.16□□□□□ -1.9
MECP2P51608 RNA5SP317-201ENST00000410176 116 ntBASIC3.16□□□□□ -1.9
MECP2P51608 Y_RNA.597-201ENST00000410463 100 ntBASIC3.16□□□□□ -1.9
MECP2P51608 RNA5SP475-201ENST00000410568 110 ntBASIC3.16□□□□□ -1.9
MECP2P51608 RNA5SP311-201ENST00000411290 116 ntBASIC3.16□□□□□ -1.9
MECP2P51608 NDUFB1P1-201ENST00000435191 180 ntBASIC3.16□□□□□ -1.9
MECP2P51608 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
MECP2P51608 CKS1BP2-201ENST00000497342 240 ntBASIC3.16□□□□□ -1.9
MECP2P51608 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.16□□□□□ -1.9
MECP2P51608 AC107222.1-201ENST00000510899 637 ntBASIC3.16□□□□□ -1.9
MECP2P51608 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.16□□□□□ -1.9
MECP2P51608 PHBP14-201ENST00000512887 367 ntBASIC3.16□□□□□ -1.9
MECP2P51608 RNA5SP315-201ENST00000516340 116 ntBASIC3.16□□□□□ -1.9
MECP2P51608 RNA5SP312-201ENST00000517068 116 ntBASIC3.16□□□□□ -1.9
MECP2P51608 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.16□□□□□ -1.9
MECP2P51608 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.16□□□□□ -1.9
MECP2P51608 AC012433.1-201ENST00000588916 398 ntBASIC3.16□□□□□ -1.9
MECP2P51608 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.16□□□□□ -1.9
MECP2P51608 AC069294.1-201ENST00000608397 350 ntBASIC3.16□□□□□ -1.9
MECP2P51608 MIR6868-201ENST00000611215 58 ntBASIC3.16□□□□□ -1.9
MECP2P51608 AL357075.2-201ENST00000614906 189 ntBASIC3.16□□□□□ -1.9
MECP2P51608 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MECP2P51608 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
MECP2P51608 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.9
MECP2P51608 AL513302.2-201ENST00000562313 1842 ntBASIC3.15□□□□□ -1.91
MECP2P51608 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
MECP2P51608 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.91
MECP2P51608 Y_RNA.477-201ENST00000384352 108 ntBASIC3.15□□□□□ -1.91
MECP2P51608 Y_RNA.541-201ENST00000384640 113 ntBASIC3.15□□□□□ -1.91
MECP2P51608 Y_RNA.570-201ENST00000384750 101 ntBASIC3.15□□□□□ -1.91
MECP2P51608 MIR218-1-201ENST00000384999 110 ntBASIC3.15□□□□□ -1.91
MECP2P51608 SNORA12-201ENST00000391162 147 ntBASIC3.15□□□□□ -1.91
MECP2P51608 MIR1294-201ENST00000408503 142 ntBASIC3.15□□□□□ -1.91
MECP2P51608 RNU4-30P-201ENST00000410245 143 ntBASIC3.15□□□□□ -1.91
MECP2P51608 AC126124.2-201ENST00000413542 321 ntBASIC3.15□□□□□ -1.91
MECP2P51608 AL691449.1-201ENST00000426570 421 ntBASIC3.15□□□□□ -1.91
MECP2P51608 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
MECP2P51608 RN7SL132P-201ENST00000478131 296 ntBASIC3.15□□□□□ -1.91
MECP2P51608 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.15□□□□□ -1.91
MECP2P51608 AC108043.1-201ENST00000512696 574 ntBASIC3.15□□□□□ -1.91
MECP2P51608 RNA5SP208-201ENST00000516156 78 ntBASIC3.15□□□□□ -1.91
MECP2P51608 RNU6-586P-201ENST00000517265 104 ntBASIC3.15□□□□□ -1.91
MECP2P51608 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.15□□□□□ -1.91
MECP2P51608 MIR3160-1-201ENST00000577972 85 ntBASIC3.15□□□□□ -1.91
MECP2P51608 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.15□□□□□ -1.91
MECP2P51608 MIR4423-201ENST00000580922 80 ntBASIC3.15□□□□□ -1.91
MECP2P51608 AC105245.1-201ENST00000581934 244 ntBASIC3.15□□□□□ -1.91
MECP2P51608 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.15□□□□□ -1.91
MECP2P51608 MIR6867-201ENST00000610636 67 ntBASIC3.15□□□□□ -1.91
MECP2P51608 AC112484.5-201ENST00000624189 228 ntBASIC3.15□□□□□ -1.91
MECP2P51608 AC068724.3-201ENST00000625906 87 ntBASIC3.15□□□□□ -1.91
MECP2P51608 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
MECP2P51608 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MECP2P51608 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
MECP2P51608 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MECP2P51608 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MECP2P51608 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms