Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.41□□□□□ -2.02
CLK1P49759 uc_338.22-201ENST00000622722 187 ntBASIC2.41□□□□□ -2.02
CLK1P49759 Z69720.2-201ENST00000624755 279 ntBASIC2.41□□□□□ -2.02
CLK1P49759 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CLK1P49759 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CLK1P49759 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.4□□□□□ -2.02
CLK1P49759 RNU6-1115P-201ENST00000362490 106 ntBASIC2.4□□□□□ -2.03
CLK1P49759 Y_RNA.146-201ENST00000363549 102 ntBASIC2.4□□□□□ -2.03
CLK1P49759 Y_RNA.162-201ENST00000363683 102 ntBASIC2.4□□□□□ -2.03
CLK1P49759 RNU6-1059P-201ENST00000363752 98 ntBASIC2.4□□□□□ -2.03
CLK1P49759 RNU6-890P-201ENST00000384121 107 ntBASIC2.4□□□□□ -2.03
CLK1P49759 MIR559-201ENST00000385188 96 ntBASIC2.4□□□□□ -2.03
CLK1P49759 RNU6-1050P-201ENST00000410388 107 ntBASIC2.4□□□□□ -2.03
CLK1P49759 AC138623.1-201ENST00000418060 216 ntBASIC2.4□□□□□ -2.03
CLK1P49759 USP9YP30-201ENST00000430729 455 ntBASIC2.4□□□□□ -2.03
CLK1P49759 AL627311.1-201ENST00000431514 115 ntBASIC2.4□□□□□ -2.03
CLK1P49759 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.4□□□□□ -2.03
CLK1P49759 RPL7P42-201ENST00000481005 679 ntBASIC2.4□□□□□ -2.03
CLK1P49759 AC097473.1-201ENST00000508142 408 ntBASIC2.4□□□□□ -2.03
CLK1P49759 RNA5SP282-201ENST00000516355 108 ntBASIC2.4□□□□□ -2.03
CLK1P49759 Y_RNA.708-201ENST00000516950 96 ntBASIC2.4□□□□□ -2.03
CLK1P49759 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CLK1P49759 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.4□□□□□ -2.03
CLK1P49759 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.4□□□□□ -2.03
CLK1P49759 PRELID2P1-201ENST00000552837 301 ntBASIC2.4□□□□□ -2.03
CLK1P49759 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.4□□□□□ -2.03
CLK1P49759 AC011494.1-201ENST00000596454 237 ntBASIC2.4□□□□□ -2.03
CLK1P49759 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
CLK1P49759 PART1_1.1-201ENST00000611761 217 ntBASIC2.4□□□□□ -2.03
CLK1P49759 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.4□□□□□ -2.03
CLK1P49759 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.4□□□□□ -2.03
CLK1P49759 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CLK1P49759 MTND5P10-201ENST00000603719 1809 ntBASIC2.4□□□□□ -2.03
CLK1P49759 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.39□□□□□ -2.03
CLK1P49759 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CLK1P49759 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CLK1P49759 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLK1P49759 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CLK1P49759 AL359851.1-201ENST00000569460 4997 ntBASIC2.39□□□□□ -2.03
CLK1P49759 Y_RNA.5-201ENST00000362334 102 ntBASIC2.39□□□□□ -2.03
CLK1P49759 RNU6-859P-201ENST00000362728 107 ntBASIC2.39□□□□□ -2.03
CLK1P49759 Y_RNA.112-201ENST00000363250 102 ntBASIC2.39□□□□□ -2.03
CLK1P49759 Y_RNA.151-201ENST00000363566 112 ntBASIC2.39□□□□□ -2.03
CLK1P49759 SNORA80A-201ENST00000363922 136 ntBASIC2.39□□□□□ -2.03
CLK1P49759 RNU6-1040P-201ENST00000383974 107 ntBASIC2.39□□□□□ -2.03
CLK1P49759 Y_RNA.445-201ENST00000384168 102 ntBASIC2.39□□□□□ -2.03
CLK1P49759 RNU6-842P-201ENST00000384269 107 ntBASIC2.39□□□□□ -2.03
CLK1P49759 MIR10A-201ENST00000385043 110 ntBASIC2.39□□□□□ -2.03
CLK1P49759 AL356057.3-201ENST00000402607 340 ntBASIC2.39□□□□□ -2.03
CLK1P49759 SNORD56-201ENST00000413522 71 ntBASIC2.39□□□□□ -2.03
CLK1P49759 PGBD4P6-201ENST00000421501 610 ntBASIC2.39□□□□□ -2.03
CLK1P49759 AC063976.3-201ENST00000426849 329 ntBASIC2.39□□□□□ -2.03
CLK1P49759 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
CLK1P49759 FTH1P25-201ENST00000447665 469 ntBASIC2.39□□□□□ -2.03
CLK1P49759 PTP4A1P4-201ENST00000512479 322 ntBASIC2.39□□□□□ -2.03
CLK1P49759 SNORA4.4-201ENST00000515921 135 ntBASIC2.39□□□□□ -2.03
CLK1P49759 RNU1-54P-201ENST00000517181 120 ntBASIC2.39□□□□□ -2.03
CLK1P49759 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.39□□□□□ -2.03
CLK1P49759 AC079600.2-201ENST00000550076 130 ntBASIC2.39□□□□□ -2.03
CLK1P49759 TRAV32-201ENST00000553993 340 ntBASIC2.39□□□□□ -2.03
CLK1P49759 EIF4BP1-201ENST00000554881 351 ntBASIC2.39□□□□□ -2.03
CLK1P49759 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.39□□□□□ -2.03
CLK1P49759 GTF3AP2-201ENST00000557014 266 ntBASIC2.39□□□□□ -2.03
CLK1P49759 MIR4635-201ENST00000583759 79 ntBASIC2.39□□□□□ -2.03
CLK1P49759 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.39□□□□□ -2.03
CLK1P49759 CYP2C61P-201ENST00000604072 290 ntBASIC2.39□□□□□ -2.03
CLK1P49759 AL360085.1-201ENST00000604713 532 ntBASIC2.39□□□□□ -2.03
CLK1P49759 AL160281.1-201ENST00000605307 311 ntBASIC2.39□□□□□ -2.03
CLK1P49759 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.39□□□□□ -2.03
CLK1P49759 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLK1P49759 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLK1P49759 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.39□□□□□ -2.03
CLK1P49759 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLK1P49759 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CLK1P49759 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-37P-201ENST00000362692 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-11P-201ENST00000364234 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 SNORA63C-201ENST00000364578 129 ntBASIC2.38□□□□□ -2.03
CLK1P49759 SNORA25B-201ENST00000365507 128 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-25P-201ENST00000383873 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-1-201ENST00000383898 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-48P-201ENST00000384161 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-36P-201ENST00000384172 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-4P-201ENST00000384205 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-5P-201ENST00000384238 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-3P-201ENST00000384314 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-16P-201ENST00000384385 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-15P-201ENST00000384534 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-2-201ENST00000384627 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-29P-201ENST00000384637 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-9-201ENST00000384776 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-33P-201ENST00000384793 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 MIR517A-201ENST00000385001 87 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-308P-201ENST00000390957 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 SNORA75.6-201ENST00000391318 127 ntBASIC2.38□□□□□ -2.03
CLK1P49759 HMGN2P39-201ENST00000398005 273 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AL030996.1-201ENST00000411430 235 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AL117339.3-201ENST00000418733 162 ntBASIC2.38□□□□□ -2.03
CLK1P49759 MTND2P23-201ENST00000422990 651 ntBASIC2.38□□□□□ -2.03
CLK1P49759 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms