Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC233981.2-201ENST00000611524 1614 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.42□□□□□ -2.18
CX3CR1P49238 RNU6-26P-201ENST00000383985 107 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 RNU6-38P-201ENST00000384085 107 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 SNORA36A-201ENST00000384221 132 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 NCOR1P3-201ENST00000420479 303 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.42□□□□□ -2.18
CX3CR1P49238 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.42□□□□□ -2.18
CX3CR1P49238 MTCO3P38-201ENST00000468910 766 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.42□□□□□ -2.18
CX3CR1P49238 AC027575.1-201ENST00000481064 460 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 AC010409.1-201ENST00000487382 476 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.42□□□□□ -2.18
CX3CR1P49238 RNU6-835P-201ENST00000516974 104 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.42□□□□□ -2.18
CX3CR1P49238 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.42□□□□□ -2.18
CX3CR1P49238 AC087441.2-201ENST00000529141 262 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 AC104383.1-201ENST00000530297 370 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.42□□□□□ -2.18
CX3CR1P49238 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.42□□□□□ -2.18
CX3CR1P49238 VN1R80P-201ENST00000597126 338 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 AC012507.3-201ENST00000603556 477 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 AC091805.2-201ENST00000603848 235 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 RNU6-85P-201ENST00000605989 107 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 AC245008.1-201ENST00000608123 476 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 SNORA43.4-201ENST00000629559 138 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CX3CR1P49238 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CX3CR1P49238 Y_RNA.41-201ENST00000362646 102 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 Y_RNA.332-201ENST00000365271 113 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 Y_RNA.378-201ENST00000365652 113 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 RNU6-338P-201ENST00000383888 105 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 RNU6-142P-201ENST00000384019 107 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 RNA5SP219-201ENST00000390940 113 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 AL627390.1-201ENST00000396055 340 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.41□□□□□ -2.18
CX3CR1P49238 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.41□□□□□ -2.18
CX3CR1P49238 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.41□□□□□ -2.18
CX3CR1P49238 AL121601.2-201ENST00000438019 707 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.41□□□□□ -2.18
CX3CR1P49238 RNU6-261P-201ENST00000459506 102 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 AC130509.1-201ENST00000464158 433 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.41□□□□□ -2.18
CX3CR1P49238 AC132942.1-201ENST00000486753 483 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 AC093534.1-201ENST00000504977 132 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
CX3CR1P49238 RNU6-295P-201ENST00000516901 104 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 SNORA31.17-201ENST00000516953 127 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 AP005597.4-201ENST00000526762 229 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 SUB1P4-201ENST00000566062 339 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 MIR3136-201ENST00000583498 78 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 BNIP3P16-201ENST00000589779 534 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 AC103591.3-201ENST00000608684 209 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.41□□□□□ -2.18
CX3CR1P49238 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
CX3CR1P49238 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.4□□□□□ -2.19
CX3CR1P49238 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CX3CR1P49238 RNU6-259P-201ENST00000383999 107 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 MIR504-201ENST00000385065 83 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CX3CR1P49238 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CX3CR1P49238 AL606923.1-201ENST00000406616 190 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.4□□□□□ -2.19
CX3CR1P49238 AL590135.1-201ENST00000422215 156 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC019205.3-201ENST00000424573 156 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 VN1R108P-201ENST00000431580 830 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC244670.1-201ENST00000436879 112 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 HMGB1P18-201ENST00000438801 619 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC016700.2-201ENST00000446011 156 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 FTH1P25-201ENST00000447665 469 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC015911.1-201ENST00000495111 156 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC021146.2-201ENST00000504736 556 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.4□□□□□ -2.19
CX3CR1P49238 SNORA25.15-201ENST00000516487 89 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC109479.2-201ENST00000517842 174 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC005786.1-201ENST00000588553 154 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC004223.2-201ENST00000590309 544 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC011494.1-201ENST00000596454 237 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC078795.3-201ENST00000602913 472 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.4□□□□□ -2.19
CX3CR1P49238 AC092954.2-201ENST00000609103 430 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 AC064836.2-201ENST00000609491 462 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 U2.17-201ENST00000611454 95 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 MIR8074-201ENST00000615081 81 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 MIR6863-201ENST00000636112 90 ntBASIC1.4□□□□□ -2.19
CX3CR1P49238 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.39□□□□□ -2.19
CX3CR1P49238 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.39□□□□□ -2.19
CX3CR1P49238 MTND4P14-201ENST00000435799 1354 ntBASIC1.39□□□□□ -2.19
CX3CR1P49238 AC006026.1-201ENST00000444025 1803 ntBASIC1.39□□□□□ -2.19
CX3CR1P49238 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CX3CR1P49238 RNU6-661P-201ENST00000362409 107 ntBASIC1.39□□□□□ -2.19
CX3CR1P49238 RNU6-1141P-201ENST00000364520 107 ntBASIC1.39□□□□□ -2.19
CX3CR1P49238 SNORA69-201ENST00000383895 132 ntBASIC1.39□□□□□ -2.19
CX3CR1P49238 RNU6-648P-201ENST00000410190 107 ntBASIC1.39□□□□□ -2.19
CX3CR1P49238 RPL23AP95-201ENST00000426806 265 ntBASIC1.39□□□□□ -2.19
CX3CR1P49238 DLGAP5P1-201ENST00000430307 464 ntBASIC1.39□□□□□ -2.19
CX3CR1P49238 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 792.3 ms