Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNA5SP269-201ENST00000459032 137 ntBASIC1.49□□□□□ -2.17
SSR1P43307 RNU7-14P-201ENST00000459331 62 ntBASIC1.49□□□□□ -2.17
SSR1P43307 AC132942.1-201ENST00000486753 483 ntBASIC1.49□□□□□ -2.17
SSR1P43307 AC091435.1-201ENST00000505442 584 ntBASIC1.49□□□□□ -2.17
SSR1P43307 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.49□□□□□ -2.17
SSR1P43307 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SSR1P43307 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.49□□□□□ -2.17
SSR1P43307 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.49□□□□□ -2.17
SSR1P43307 Z98751.3-201ENST00000604447 521 ntBASIC1.49□□□□□ -2.17
SSR1P43307 PCGEM1.1-201ENST00000613431 131 ntBASIC1.49□□□□□ -2.17
SSR1P43307 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.49□□□□□ -2.17
SSR1P43307 SNORA43.4-201ENST00000629559 138 ntBASIC1.49□□□□□ -2.17
SSR1P43307 RNU6-112P-201ENST00000363599 104 ntBASIC1.48□□□□□ -2.17
SSR1P43307 RNU6-348P-201ENST00000384386 107 ntBASIC1.48□□□□□ -2.17
SSR1P43307 RPS29P13-201ENST00000402041 169 ntBASIC1.48□□□□□ -2.17
SSR1P43307 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.48□□□□□ -2.17
SSR1P43307 AC123900.1-201ENST00000420390 96 ntBASIC1.48□□□□□ -2.17
SSR1P43307 PIGFP2-201ENST00000421400 651 ntBASIC1.48□□□□□ -2.17
SSR1P43307 VN1R108P-201ENST00000431580 830 ntBASIC1.48□□□□□ -2.17
SSR1P43307 USP9YP29-201ENST00000445112 563 ntBASIC1.48□□□□□ -2.17
SSR1P43307 snoU13.6-201ENST00000458785 104 ntBASIC1.48□□□□□ -2.17
SSR1P43307 snoU13.30-201ENST00000458951 104 ntBASIC1.48□□□□□ -2.17
SSR1P43307 AC022447.4-201ENST00000504053 364 ntBASIC1.48□□□□□ -2.17
SSR1P43307 CCDC34P1-201ENST00000507441 517 ntBASIC1.48□□□□□ -2.17
SSR1P43307 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.48□□□□□ -2.17
SSR1P43307 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.48□□□□□ -2.17
SSR1P43307 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
SSR1P43307 RNU6-1038P-201ENST00000516516 104 ntBASIC1.48□□□□□ -2.17
SSR1P43307 RNU1-92P-201ENST00000517017 135 ntBASIC1.48□□□□□ -2.17
SSR1P43307 RNU6-430P-201ENST00000517078 107 ntBASIC1.48□□□□□ -2.17
SSR1P43307 MIR3136-201ENST00000583498 78 ntBASIC1.48□□□□□ -2.17
SSR1P43307 MIR8074-201ENST00000615081 81 ntBASIC1.48□□□□□ -2.17
SSR1P43307 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SSR1P43307 RNU6-438P-201ENST00000365561 103 ntBASIC1.47□□□□□ -2.17
SSR1P43307 SNORA32.2-201ENST00000384049 122 ntBASIC1.47□□□□□ -2.17
SSR1P43307 MIR548B-201ENST00000385247 97 ntBASIC1.47□□□□□ -2.17
SSR1P43307 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.47□□□□□ -2.17
SSR1P43307 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.47□□□□□ -2.17
SSR1P43307 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.47□□□□□ -2.17
SSR1P43307 AC099677.2-201ENST00000436385 175 ntBASIC1.47□□□□□ -2.17
SSR1P43307 AC132479.1-201ENST00000449160 144 ntBASIC1.47□□□□□ -2.17
SSR1P43307 MTND1P27-201ENST00000451117 902 ntBASIC1.47□□□□□ -2.17
SSR1P43307 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.47□□□□□ -2.17
SSR1P43307 AC005741.1-201ENST00000511094 432 ntBASIC1.47□□□□□ -2.17
SSR1P43307 AC109479.2-201ENST00000517842 174 ntBASIC1.47□□□□□ -2.17
SSR1P43307 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.47□□□□□ -2.17
SSR1P43307 AC087441.2-201ENST00000529141 262 ntBASIC1.47□□□□□ -2.17
SSR1P43307 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SSR1P43307 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.47□□□□□ -2.17
SSR1P43307 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.47□□□□□ -2.17
SSR1P43307 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.47□□□□□ -2.17
SSR1P43307 HIF1AP1-201ENST00000553642 175 ntBASIC1.47□□□□□ -2.17
SSR1P43307 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
SSR1P43307 AC145350.1-201ENST00000567426 208 ntBASIC1.47□□□□□ -2.17
SSR1P43307 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.47□□□□□ -2.17
SSR1P43307 AC073114.1-201ENST00000612027 490 ntBASIC1.47□□□□□ -2.17
SSR1P43307 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
SSR1P43307 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.47□□□□□ -2.17
SSR1P43307 RNU4-13P-201ENST00000364019 141 ntBASIC1.46□□□□□ -2.18
SSR1P43307 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.46□□□□□ -2.18
SSR1P43307 RNU6-296P-201ENST00000384608 107 ntBASIC1.46□□□□□ -2.18
SSR1P43307 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.46□□□□□ -2.18
SSR1P43307 TOMM22P2-201ENST00000430735 237 ntBASIC1.46□□□□□ -2.18
SSR1P43307 AL591806.2-201ENST00000433122 173 ntBASIC1.46□□□□□ -2.18
SSR1P43307 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.46□□□□□ -2.18
SSR1P43307 SNRPFP3-201ENST00000457792 225 ntBASIC1.46□□□□□ -2.18
SSR1P43307 RNU6-333P-201ENST00000459117 107 ntBASIC1.46□□□□□ -2.18
SSR1P43307 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.46□□□□□ -2.18
SSR1P43307 AC105417.1-201ENST00000514691 285 ntBASIC1.46□□□□□ -2.18
SSR1P43307 LRRC34P2-201ENST00000514850 553 ntBASIC1.46□□□□□ -2.18
SSR1P43307 RNU5F-4P-201ENST00000516581 114 ntBASIC1.46□□□□□ -2.18
SSR1P43307 DEFB131C-201ENST00000528817 165 ntBASIC1.46□□□□□ -2.18
SSR1P43307 AC090517.1-201ENST00000569307 266 ntBASIC1.46□□□□□ -2.18
SSR1P43307 MIR3923-201ENST00000579521 83 ntBASIC1.46□□□□□ -2.18
SSR1P43307 AP001836.1-201ENST00000604675 523 ntBASIC1.46□□□□□ -2.18
SSR1P43307 AC083806.3-201ENST00000614016 455 ntBASIC1.46□□□□□ -2.18
SSR1P43307 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.46□□□□□ -2.18
SSR1P43307 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.46□□□□□ -2.18
SSR1P43307 AC091812.1-201ENST00000432235 1948 ntBASIC1.46□□□□□ -2.18
SSR1P43307 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SSR1P43307 RNU6-862P-201ENST00000362804 105 ntBASIC1.45□□□□□ -2.18
SSR1P43307 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
SSR1P43307 RNU1-17P-201ENST00000363022 152 ntBASIC1.45□□□□□ -2.18
SSR1P43307 U3.9-201ENST00000363823 204 ntBASIC1.45□□□□□ -2.18
SSR1P43307 MIR208B-201ENST00000401172 77 ntBASIC1.45□□□□□ -2.18
SSR1P43307 MTATP6P18-201ENST00000417994 673 ntBASIC1.45□□□□□ -2.18
SSR1P43307 RPL23AP95-201ENST00000426806 265 ntBASIC1.45□□□□□ -2.18
SSR1P43307 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.45□□□□□ -2.18
SSR1P43307 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.45□□□□□ -2.18
SSR1P43307 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.45□□□□□ -2.18
SSR1P43307 RNA5SP437-201ENST00000517249 129 ntBASIC1.45□□□□□ -2.18
SSR1P43307 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.45□□□□□ -2.18
SSR1P43307 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
SSR1P43307 MIR4528-201ENST00000577763 90 ntBASIC1.45□□□□□ -2.18
SSR1P43307 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.45□□□□□ -2.18
SSR1P43307 AC005786.1-201ENST00000588553 154 ntBASIC1.45□□□□□ -2.18
SSR1P43307 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.45□□□□□ -2.18
SSR1P43307 AC023510.2-201ENST00000622162 746 ntBASIC1.45□□□□□ -2.18
SSR1P43307 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.45□□□□□ -2.18
SSR1P43307 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms