Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.65□□□□□ -2.31
CASQ1P31415 RPS27P22-201ENST00000478056 241 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.65□□□□□ -2.31
CASQ1P31415 RBBP4P6-201ENST00000508098 202 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.65□□□□□ -2.31
CASQ1P31415 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.65□□□□□ -2.31
CASQ1P31415 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.65□□□□□ -2.31
CASQ1P31415 AC108706.1-201ENST00000611053 297 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
CASQ1P31415 uc_338.17-201ENST00000619633 179 ntBASIC0.65□□□□□ -2.31
CASQ1P31415 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CASQ1P31415 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.31
CASQ1P31415 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CASQ1P31415 U3.4-201ENST00000363352 213 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 RNU6-1080P-201ENST00000383982 107 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 RNU6-418P-201ENST00000384035 107 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 RNU6-378P-201ENST00000384324 107 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 RNU6-692P-201ENST00000384496 107 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 MIR520E-201ENST00000384867 87 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 RNU6-1242P-201ENST00000391052 103 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 SNORA26.3-201ENST00000391119 136 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.64□□□□□ -2.31
CASQ1P31415 AC002486.1-201ENST00000435098 391 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 MTND3P1-201ENST00000441336 220 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 AL358794.1-201ENST00000445689 381 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.64□□□□□ -2.31
CASQ1P31415 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 RN7SKP265-201ENST00000516448 223 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 RNU6-567P-201ENST00000516746 107 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 RNA5SP337-201ENST00000517007 109 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.64□□□□□ -2.31
CASQ1P31415 AP003484.1-201ENST00000530974 250 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.64□□□□□ -2.31
CASQ1P31415 AC090517.1-201ENST00000569307 266 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.64□□□□□ -2.31
CASQ1P31415 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
CASQ1P31415 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.64□□□□□ -2.31
CASQ1P31415 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
CASQ1P31415 SNORA24.1-201ENST00000384401 135 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 SNORA80D-201ENST00000384488 135 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 USP9YP28-201ENST00000435142 589 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AL121890.1-201ENST00000435457 205 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AC092991.1-201ENST00000477176 376 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AC104982.1-201ENST00000478775 574 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AC108210.2-201ENST00000503681 201 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AC105758.1-201ENST00000506038 399 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AC117522.1-201ENST00000509821 380 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AC092451.2-201ENST00000538746 658 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 CYP4A27P-201ENST00000567218 190 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AL929325.1-201ENST00000603096 117 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 GHRLOS.1-201ENST00000610995 70 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AL353997.5-201ENST00000618886 171 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 SNORD3E-202ENST00000627253 216 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 AC106858.1-201ENST00000637497 429 ntBASIC0.63□□□□□ -2.31
CASQ1P31415 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CASQ1P31415 RNU4-12P-201ENST00000365233 139 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 RPL21P1-201ENST00000399532 476 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.62□□□□□ -2.31
CASQ1P31415 C1DP4-201ENST00000455429 424 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 AC016550.1-201ENST00000505348 785 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.62□□□□□ -2.31
CASQ1P31415 RNU6-113P-201ENST00000516653 101 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 AC109479.2-201ENST00000517842 174 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.62□□□□□ -2.31
CASQ1P31415 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.62□□□□□ -2.31
CASQ1P31415 AC008521.1-201ENST00000587471 187 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 AC078795.3-201ENST00000602913 472 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 AL031281.1-201ENST00000604049 488 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 AC005858.4-201ENST00000623191 700 ntBASIC0.62□□□□□ -2.31
CASQ1P31415 MIR300-201ENST00000401138 83 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 RNU2-39P-201ENST00000410604 198 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 MTCO3P18-201ENST00000440206 761 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.61□□□□□ -2.31
CASQ1P31415 AC016632.1-201ENST00000503994 196 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 MTCO3P7-201ENST00000510008 774 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 RNU6-1146P-201ENST00000516282 102 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 RNU6-922P-201ENST00000516753 99 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 APOOP3-201ENST00000536787 586 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 ZNF519P3-201ENST00000557158 1032 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.61□□□□□ -2.31
CASQ1P31415 AL139418.1-201ENST00000613613 177 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.61□□□□□ -2.31
CASQ1P31415 AL450472.1-202ENST00000637286 180 ntBASIC0.61□□□□□ -2.31
CASQ1P31415 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CASQ1P31415 snoU2-30.2-201ENST00000362805 70 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 SNORD114-27-201ENST00000363766 70 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 Y_RNA.327-201ENST00000365201 102 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 Y_RNA.363-201ENST00000365529 113 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 SNORA18.2-201ENST00000383865 132 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 RNU6-1031P-201ENST00000384773 107 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 AF228730.1-201ENST00000397972 663 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 RNU6-757P-201ENST00000410334 100 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.6□□□□□ -2.31
CASQ1P31415 AC007283.2-201ENST00000424739 197 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 AC091435.1-201ENST00000505442 584 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 AC024995.1-201ENST00000523014 93 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 TPRKBP2-201ENST00000565969 475 ntBASIC0.6□□□□□ -2.31
CASQ1P31415 AC091489.2-201ENST00000566263 604 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms