Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RN7SKP58-201ENST00000411010 305 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.36□□□□□ -1.87
CNGA1P29973 MTCYBP10-201ENST00000424905 650 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNGA1P29973 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.36□□□□□ -1.87
CNGA1P29973 MTCO3P29-201ENST00000432119 779 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.36□□□□□ -1.87
CNGA1P29973 MTCYBP6-201ENST00000441810 138 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AL137792.2-201ENST00000443484 235 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 EEF1B2P7-201ENST00000451177 676 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.36□□□□□ -1.87
CNGA1P29973 AC140059.1-201ENST00000489238 361 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.36□□□□□ -1.87
CNGA1P29973 AC007536.1-201ENST00000533382 349 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AC004584.2-201ENST00000570407 410 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AC090616.3-201ENST00000582184 217 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.36□□□□□ -1.87
CNGA1P29973 AL713866.2-201ENST00000603579 219 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AC004832.5-201ENST00000608677 401 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AC005520.5-201ENST00000613926 164 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AC137590.2-201ENST00000619709 240 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 AC134503.1-201ENST00000633048 54 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CNGA1P29973 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNGA1P29973 AC093831.2-201ENST00000624393 3427 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 FAM35CP-201ENST00000554755 2470 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 Y_RNA.128-201ENST00000363391 112 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 Y_RNA.252-201ENST00000364556 101 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 Y_RNA.405-201ENST00000383979 100 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 RNU6-1227P-201ENST00000383981 107 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 Y_RNA.451-201ENST00000384200 100 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 RNU6-474P-201ENST00000384243 107 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 Y_RNA.524-201ENST00000384564 100 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 Y_RNA.561-201ENST00000384694 100 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 AL139095.1-201ENST00000404326 391 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 MIR1261-201ENST00000408659 82 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 BMS1P22-201ENST00000414726 313 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.35□□□□□ -1.87
CNGA1P29973 AC018865.2-201ENST00000423631 129 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 AC063976.3-201ENST00000426849 329 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 snoU13.6-201ENST00000458785 104 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 TRBV12-1-201ENST00000479785 344 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 RNU7-175P-201ENST00000515915 61 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 SNRPGP18-201ENST00000553000 214 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 MIR3923-201ENST00000579521 83 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.35□□□□□ -1.87
CNGA1P29973 AL356280.1-201ENST00000603614 379 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 RMST_6.1-201ENST00000611980 203 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 AC091925.1-201ENST00000623204 462 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CNGA1P29973 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.35□□□□□ -1.87
CNGA1P29973 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNGA1P29973 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.35□□□□□ -1.87
CNGA1P29973 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CNGA1P29973 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CNGA1P29973 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.35□□□□□ -1.87
CNGA1P29973 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.35□□□□□ -1.87
CNGA1P29973 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CNGA1P29973 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNGA1P29973 snoU2_19.1-201ENST00000362361 80 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 Y_RNA.445-201ENST00000384168 102 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 U8.10-201ENST00000384260 133 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 RNU6-851P-201ENST00000384565 107 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 RNU6-220P-201ENST00000390919 107 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 MIR887-201ENST00000401258 79 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 MIR1302-11-201ENST00000408051 138 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 MIR1302-9-201ENST00000408365 138 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 MIR1302-10-201ENST00000408734 138 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 MRPS18CP6-201ENST00000423587 223 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 OR2AQ1P-201ENST00000451972 200 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 MIR1302-2-201ENST00000607096 138 ntBASIC3.34□□□□□ -1.87
CNGA1P29973 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.34□□□□□ -1.88
CNGA1P29973 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CNGA1P29973 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CNGA1P29973 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.33□□□□□ -1.88
CNGA1P29973 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.33□□□□□ -1.88
CNGA1P29973 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.33□□□□□ -1.88
CNGA1P29973 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CNGA1P29973 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.33□□□□□ -1.88
CNGA1P29973 RNA5SP432-201ENST00000362480 116 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 RNU6-17P-201ENST00000384245 107 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 RNU6-18P-201ENST00000384527 107 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 RNU6-1011P-201ENST00000384668 107 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 MIR32-201ENST00000384965 70 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 MIR548P-201ENST00000408336 84 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 RNU2-52P-201ENST00000410680 190 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 AC104332.2-201ENST00000429959 156 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 AC099799.1-201ENST00000439809 192 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 RPL21P2-201ENST00000440049 481 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 Y_RNA.631-201ENST00000459607 101 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 RN7SL20P-201ENST00000488827 297 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 RN7SKP282-201ENST00000516824 299 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.33□□□□□ -1.88
CNGA1P29973 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.33□□□□□ -1.88
CNGA1P29973 AC107016.2-201ENST00000547968 190 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 AC079600.2-201ENST00000550076 130 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 AC020661.2-201ENST00000560114 134 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 SNRPGP17-201ENST00000603780 214 ntBASIC3.33□□□□□ -1.88
CNGA1P29973 AC100812.1-201ENST00000607622 580 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms