Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 Y_RNA.549-201ENST00000384657 102 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 EIF1P1-201ENST00000421436 341 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 SNX2P2-201ENST00000424553 323 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 RPS23P5-201ENST00000495419 428 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 UBL5P1-201ENST00000507979 193 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 AC117522.1-201ENST00000509821 380 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.65□□□□□ -2.31
COL4A5P29400 RNA5SP481-201ENST00000516814 122 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.65□□□□□ -2.31
COL4A5P29400 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.65□□□□□ -2.31
COL4A5P29400 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.65□□□□□ -2.31
COL4A5P29400 MIR3923-201ENST00000579521 83 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.65□□□□□ -2.31
COL4A5P29400 AL356157.2-201ENST00000605122 111 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 AC008945.2-201ENST00000606056 604 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 AL590240.4-201ENST00000616908 390 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 AC010615.1-201ENST00000594254 1764 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
COL4A5P29400 AL445523.1-201ENST00000451184 1362 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 Y_RNA.136-201ENST00000363444 102 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 RPL22P18-201ENST00000417197 377 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 AC027119.1-201ENST00000440877 241 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 RNU6-377P-201ENST00000515965 102 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 SCARNA1-201ENST00000517138 166 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.64□□□□□ -2.31
COL4A5P29400 AC010620.1-201ENST00000601088 1102 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 DEFB131E-202ENST00000602581 683 ntBASIC0.64□□□□□ -2.31
COL4A5P29400 Y_RNA.46-201ENST00000362695 102 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 RNU6-1187P-201ENST00000364771 110 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 RNU6-1176P-201ENST00000390955 107 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 AC073614.1-201ENST00000438690 650 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.63□□□□□ -2.31
COL4A5P29400 AC069257.2-201ENST00000441819 155 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 AC007969.2-201ENST00000441891 191 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 RPS27AP8-201ENST00000452665 445 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.63□□□□□ -2.31
COL4A5P29400 MTCO3P28-201ENST00000513351 515 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 AC116347.2-201ENST00000514912 523 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.63□□□□□ -2.31
COL4A5P29400 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.63□□□□□ -2.31
COL4A5P29400 MIR548AC-201ENST00000585049 88 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 MZT1P2-201ENST00000604387 248 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 AC090578.1-201ENST00000604955 591 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 RPL17P51-201ENST00000605218 238 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 AP002360.4-201ENST00000606980 481 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 AC092106.3-201ENST00000611308 722 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 RMST_7.1-201ENST00000621935 268 ntBASIC0.63□□□□□ -2.31
COL4A5P29400 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.63□□□□□ -2.31
COL4A5P29400 RNY1P12-201ENST00000364251 105 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 SNORA29-201ENST00000384183 140 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 ARL5AP1-201ENST00000418991 388 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC078809.1-201ENST00000427601 140 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC243964.1-201ENST00000441814 261 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.62□□□□□ -2.31
COL4A5P29400 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.62□□□□□ -2.31
COL4A5P29400 RPL39P28-201ENST00000465655 155 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 RPS26P45-201ENST00000471748 340 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.62□□□□□ -2.31
COL4A5P29400 SNORA3.4-201ENST00000515969 96 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 RNU7-40P-201ENST00000516397 64 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 RNU5F-4P-201ENST00000516581 114 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AP003034.1-201ENST00000534621 422 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.62□□□□□ -2.31
COL4A5P29400 AC090115.3-201ENST00000553218 849 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.62□□□□□ -2.31
COL4A5P29400 MTCYBP33-201ENST00000575007 1130 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 MIR4307-201ENST00000582802 84 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AP000860.1-201ENST00000605250 559 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC012676.2-201ENST00000619258 186 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC103706.2-201ENST00000638080 240 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 SNORD56.2-201ENST00000363242 71 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 RNU6-1141P-201ENST00000364520 107 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 SNORA22-201ENST00000383907 134 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 SNORA75B-201ENST00000384053 137 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 SNORA22C-201ENST00000384614 134 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 MIR329-2-201ENST00000385029 84 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 SNORA12-201ENST00000391162 147 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 COX6CP10-201ENST00000416832 224 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 MTND2P4-201ENST00000445034 1004 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.62□□□□□ -2.31
COL4A5P29400 AC074344.1-201ENST00000512823 224 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 MTATP6P15-201ENST00000527233 835 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC120349.3-201ENST00000624377 529 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AC006927.4-201ENST00000639187 543 ntBASIC0.62□□□□□ -2.31
COL4A5P29400 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.61□□□□□ -2.31
COL4A5P29400 RNU5E-10P-201ENST00000363506 118 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 RNU4-92P-201ENST00000363783 136 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 AC092809.3-201ENST00000415453 231 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A5P29400 CALM2P2-201ENST00000428512 440 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 SNORD116-28-201ENST00000516123 91 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 AP003327.1-201ENST00000529684 127 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.61□□□□□ -2.31
COL4A5P29400 PCMTD1P2-201ENST00000565017 355 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 NIFKP6-201ENST00000598115 845 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 AL590229.1-201ENST00000603497 542 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 AC080013.3-201ENST00000606839 578 ntBASIC0.61□□□□□ -2.31
COL4A5P29400 AL139022.2-201ENST00000606934 443 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms