Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-856P-201ENST00000516959 98 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 RNA5SP503-201ENST00000517047 117 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 AL442163.3-201ENST00000554110 156 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 AL137100.2-201ENST00000555786 315 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 MIR3923-201ENST00000579521 83 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 RPL17P51-201ENST00000605218 238 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 AC211469.2-201ENST00000605461 205 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 MIR6857-201ENST00000613267 93 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.66□□□□□ -2.3
HLA-DMBP28068 MTND4P14-201ENST00000435799 1354 ntBASIC0.66□□□□□ -2.3
HLA-DMBP28068 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
HLA-DMBP28068 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.31
HLA-DMBP28068 U3.4-201ENST00000363352 213 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 Y_RNA.796-201ENST00000364268 102 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 RNU4-56P-201ENST00000364700 142 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 SNORD32A-201ENST00000364805 84 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 Y_RNA.799-201ENST00000364992 102 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 RNU1-36P-201ENST00000365130 165 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 RNU6-692P-201ENST00000384496 107 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 C1DP2-201ENST00000418167 426 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 POLR2J4-204ENST00000418424 324 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.65□□□□□ -2.31
HLA-DMBP28068 RNU7-14P-201ENST00000459331 62 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 AP001893.2-201ENST00000526949 202 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 HSPE1P4-201ENST00000550617 308 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 ZNF321P-202ENST00000550843 495 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.65□□□□□ -2.31
HLA-DMBP28068 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.65□□□□□ -2.31
HLA-DMBP28068 MIR151B-201ENST00000584249 96 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 HMGN1P30-201ENST00000589286 268 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.65□□□□□ -2.31
HLA-DMBP28068 AC013244.2-201ENST00000603396 103 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 AL391646.1-201ENST00000603860 190 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 AL031775.1-201ENST00000607014 887 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
HLA-DMBP28068 AC040896.1-201ENST00000613819 479 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 AC104010.1-201ENST00000616889 150 ntBASIC0.65□□□□□ -2.31
HLA-DMBP28068 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
HLA-DMBP28068 MIR19B1-201ENST00000384829 87 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 RNU6-293P-201ENST00000411259 106 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC007283.2-201ENST00000424739 197 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.64□□□□□ -2.31
HLA-DMBP28068 USP9YP14-201ENST00000430663 563 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC119618.1-201ENST00000434191 222 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC084290.1-201ENST00000434995 374 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
HLA-DMBP28068 EXOSC3P1-201ENST00000448649 500 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC013470.1-201ENST00000453438 462 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 SNRPFP3-201ENST00000457792 225 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC074344.1-201ENST00000512823 224 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 RNU6-377P-201ENST00000515965 102 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.64□□□□□ -2.31
HLA-DMBP28068 MTND4LP18-201ENST00000526864 291 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 EIF4A1P12-201ENST00000551910 141 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AP005136.1-201ENST00000579765 429 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 MIR4661-201ENST00000582720 75 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC107304.1-201ENST00000604229 296 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 FAM71BP1-201ENST00000604431 523 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AL356157.2-201ENST00000605122 111 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC008147.4-201ENST00000617570 1204 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 MIR6788-201ENST00000618842 66 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC136475.10-201ENST00000620253 385 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 AC019226.2-201ENST00000625973 424 ntBASIC0.64□□□□□ -2.31
HLA-DMBP28068 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC092268.1-201ENST00000342691 405 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HLA-DMBP28068 SNORD114-2-201ENST00000363953 78 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 RNU6-534P-201ENST00000364877 106 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 RNU6-336P-201ENST00000364891 107 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 RNU6-641P-201ENST00000384006 107 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 RNU6-83P-201ENST00000384568 112 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 MIR146A-201ENST00000385201 99 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AL356776.1-201ENST00000406574 447 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DMBP28068 RPL23AP95-201ENST00000426806 265 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AL133396.1-201ENST00000432048 687 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DMBP28068 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC073910.1-201ENST00000445047 438 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC067942.3-201ENST00000512025 362 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 RNU6-1041P-201ENST00000516254 102 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 RNU5F-4P-201ENST00000516581 114 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 RNU6-165P-201ENST00000517170 99 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC109479.2-201ENST00000517842 174 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.63□□□□□ -2.31
HLA-DMBP28068 AP003181.2-201ENST00000528941 181 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC090888.2-201ENST00000559765 1144 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC091489.2-201ENST00000566263 604 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 SNORA59B-202ENST00000578183 701 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AL359999.1-201ENST00000604513 294 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC008945.2-201ENST00000606056 604 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AC018645.2-201ENST00000609151 472 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 RMST_2.1-201ENST00000617263 136 ntBASIC0.63□□□□□ -2.31
HLA-DMBP28068 AL031667.3-201ENST00000620124 655 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 536.8 ms