Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAMP1P23763 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VAMP1P23763 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VAMP1P23763 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.45□□□□□ -1.86
VAMP1P23763 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VAMP1P23763 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VAMP1P23763 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VAMP1P23763 Y_RNA.14-201ENST00000362415 103 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 Y_RNA.16-201ENST00000362421 102 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 Y_RNA.307-201ENST00000365022 117 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 RNU6-213P-201ENST00000384051 104 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 RNA5SP397-201ENST00000391323 118 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 MIR1185-2-201ENST00000408687 86 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 CYCSP19-201ENST00000411715 316 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 AC123900.1-201ENST00000420390 96 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 AC008134.1-201ENST00000420943 193 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 RPEP3-201ENST00000425462 676 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.44□□□□□ -1.86
VAMP1P23763 RNU2-34P-201ENST00000516534 121 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.44□□□□□ -1.86
VAMP1P23763 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.44□□□□□ -1.86
VAMP1P23763 MIR3126-201ENST00000577443 74 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 AC026271.5-201ENST00000577873 130 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 MIR3671-201ENST00000580455 88 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 AL512605.2-201ENST00000592972 256 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 AC019176.2-201ENST00000611579 315 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 MIR6826-201ENST00000617808 98 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.44□□□□□ -1.86
VAMP1P23763 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VAMP1P23763 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VAMP1P23763 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.43□□□□□ -1.86
VAMP1P23763 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.43□□□□□ -1.86
VAMP1P23763 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
VAMP1P23763 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
VAMP1P23763 SNORA51.1-201ENST00000363243 140 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 MIR592-201ENST00000384959 97 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.43□□□□□ -1.86
VAMP1P23763 MIR298-201ENST00000401212 88 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 CHEK2P5-201ENST00000423877 246 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 RPL23AP81-201ENST00000455252 467 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 SUMO2P15-201ENST00000604285 278 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 AL590240.4-201ENST00000616908 390 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 AP005019.3-201ENST00000620418 560 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.43□□□□□ -1.86
VAMP1P23763 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
VAMP1P23763 SDAD1P1-202ENST00000524156 2051 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
VAMP1P23763 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VAMP1P23763 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VAMP1P23763 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VAMP1P23763 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.42□□□□□ -1.86
VAMP1P23763 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VAMP1P23763 MIR335-201ENST00000362173 94 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 MIR331-201ENST00000362302 94 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 SNORA20.1-201ENST00000364790 130 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 RNU6-326P-201ENST00000365480 107 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 Y_RNA.477-201ENST00000384352 108 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 RNU6-1235P-201ENST00000384559 107 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 MIR105-2-201ENST00000385083 81 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 RPS16P5-201ENST00000406501 404 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 MIR1253-201ENST00000408273 105 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 SRIP3-201ENST00000413200 219 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AC017079.2-201ENST00000416102 485 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 DBIP2-201ENST00000419076 262 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.42□□□□□ -1.86
VAMP1P23763 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.42□□□□□ -1.86
VAMP1P23763 RPL23AP46-201ENST00000438548 490 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.42□□□□□ -1.86
VAMP1P23763 AL500522.2-201ENST00000448562 343 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 PRELID3BP1-201ENST00000457142 540 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 RNU6-498P-201ENST00000459468 107 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 SERF1AP1-201ENST00000514575 187 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AP002001.1-203ENST00000534002 267 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AC023157.2-201ENST00000540596 141 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 PRELID2P1-201ENST00000552837 301 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.42□□□□□ -1.86
VAMP1P23763 AC007448.1-201ENST00000582714 234 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AL049539.1-201ENST00000611964 459 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AP001282.2-201ENST00000616149 309 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 AC087385.3-201ENST00000620477 187 ntBASIC3.42□□□□□ -1.86
VAMP1P23763 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.42□□□□□ -1.86
VAMP1P23763 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.42□□□□□ -1.86
VAMP1P23763 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.42□□□□□ -1.86
VAMP1P23763 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VAMP1P23763 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VAMP1P23763 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
VAMP1P23763 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VAMP1P23763 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
VAMP1P23763 SNORD35B-201ENST00000363660 87 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 RNU6-1248P-201ENST00000391096 64 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.41□□□□□ -1.86
VAMP1P23763 CEACAMP7-201ENST00000444105 496 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 SUMO1P2-201ENST00000452524 304 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.41□□□□□ -1.86
VAMP1P23763 RPL21P126-201ENST00000470049 478 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 SNORA70.12-201ENST00000516084 153 ntBASIC3.41□□□□□ -1.86
VAMP1P23763 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms