Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 AC019205.3-201ENST00000424573 156 ntBASIC4.1□□□□□ -1.75
PTPRAP18433 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPRAP18433 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.1□□□□□ -1.75
PTPRAP18433 SEPT7P4-201ENST00000437076 306 ntBASIC4.1□□□□□ -1.75
PTPRAP18433 AC012308.1-201ENST00000451232 178 ntBASIC4.1□□□□□ -1.75
PTPRAP18433 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPRAP18433 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.1□□□□□ -1.75
PTPRAP18433 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRAP18433 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRAP18433 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
PTPRAP18433 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPRAP18433 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPRAP18433 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTPRAP18433 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 RNU6-727P-201ENST00000363592 107 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 Y_RNA.182-201ENST00000363880 111 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 SNORD74.4-201ENST00000364129 80 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 Y_RNA.215-201ENST00000364204 112 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 RNU6-312P-201ENST00000364629 107 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 RNU6-818P-201ENST00000364837 108 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 SNORA40.19-201ENST00000390846 128 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPRAP18433 RNA5SP129-201ENST00000410276 118 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 RNU2-54P-201ENST00000410299 190 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 RN7SKP111-201ENST00000410349 271 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPRAP18433 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.09□□□□□ -1.75
PTPRAP18433 PHBP14-201ENST00000512887 367 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 SNORD116-25-201ENST00000516517 92 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 RNA5SP468-201ENST00000516782 93 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 RNU6-928P-201ENST00000516876 104 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 RNU6-579P-201ENST00000516879 102 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPRAP18433 AC090897.2-201ENST00000581715 130 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPRAP18433 AL365222.1-201ENST00000614661 98 ntBASIC4.09□□□□□ -1.75
PTPRAP18433 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PTPRAP18433 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPRAP18433 ADAM3A-203ENST00000461344 2157 ntBASIC4.09□□□□□ -1.76
PTPRAP18433 AC073073.2-201ENST00000609827 2578 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRAP18433 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRAP18433 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRAP18433 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRAP18433 Y_RNA.23-201ENST00000362496 106 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 SNORA31-201ENST00000362607 130 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 RNU4-84P-201ENST00000364200 139 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 RNU4-17P-201ENST00000365598 141 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 SNORA48.5-201ENST00000391143 135 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 Y_RNA.586-201ENST00000391146 98 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRAP18433 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPRAP18433 HMGN2P10-201ENST00000448085 265 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRAP18433 RPL26P9-201ENST00000457466 433 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 AC007215.1-201ENST00000464893 276 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 RPS27AP9-201ENST00000477681 438 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 AC090525.1-201ENST00000479116 478 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPRAP18433 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPRAP18433 RNU6-426P-201ENST00000516464 97 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPRAP18433 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPRAP18433 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPRAP18433 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.08□□□□□ -1.76
PTPRAP18433 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRAP18433 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPRAP18433 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPRAP18433 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPRAP18433 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPRAP18433 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPRAP18433 AL356274.2-201ENST00000624379 3752 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 Y_RNA.75-201ENST00000362927 97 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 Y_RNA.357-201ENST00000365487 109 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 RNU6-1168P-201ENST00000390831 104 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 AC009963.1-201ENST00000417265 157 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPRAP18433 Y_RNA.637-201ENST00000459424 114 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 S100A11P1-201ENST00000477525 312 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 RN7SL504P-201ENST00000494496 287 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPRAP18433 RNA5SP272-201ENST00000516095 111 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 AP004242.1-201ENST00000533701 349 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 AC021739.1-201ENST00000559631 174 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 MIR3674-201ENST00000636576 68 ntBASIC4.07□□□□□ -1.76
PTPRAP18433 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPRAP18433 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPRAP18433 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPRAP18433 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPRAP18433 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PTPRAP18433 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PTPRAP18433 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPRAP18433 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPRAP18433 OTUD4P1-201ENST00000237841 3067 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPRAP18433 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPRAP18433 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPRAP18433 Y_RNA.121-201ENST00000363309 113 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 RNU6-151P-201ENST00000364158 107 ntBASIC4.06□□□□□ -1.76
PTPRAP18433 Y_RNA.329-201ENST00000365209 107 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms