Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC005345.1-201ENST00000431868 217 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 AL162725.1-201ENST00000435405 301 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 AC012308.1-201ENST00000451232 178 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.6□□□□□ -2.51
HMGA1P17096 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.6□□□□□ -2.51
HMGA1P17096 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.6□□□□□ -2.51
HMGA1P17096 SNORD126-201ENST00000459475 77 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 AC105185.1-201ENST00000518705 535 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.6□□□□□ -2.51
HMGA1P17096 AC109810.1-201ENST00000534066 224 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 AC136618.2-201ENST00000575091 400 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 MIR6086-201ENST00000638065 55 ntBASIC-0.6□□□□□ -2.51
HMGA1P17096 RNA5SP517-201ENST00000364724 117 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 SNORD41-201ENST00000386967 70 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 SNORA40.8-201ENST00000411034 126 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 AC068533.2-201ENST00000411872 306 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.61□□□□□ -2.51
HMGA1P17096 AC016909.1-201ENST00000415916 166 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 AC123900.1-201ENST00000420390 96 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 MTCO3P1-205ENST00000422088 832 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.61□□□□□ -2.51
HMGA1P17096 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 HMGB1P28-201ENST00000507778 552 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 AC027338.1-201ENST00000514840 825 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 RNU6-927P-201ENST00000516199 100 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.61□□□□□ -2.51
HMGA1P17096 AC007751.1-201ENST00000529260 376 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.61□□□□□ -2.51
HMGA1P17096 AC092325.1-201ENST00000566449 554 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 BNIP3P24-201ENST00000593398 557 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 AL161798.1-201ENST00000604630 131 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 AP002360.4-201ENST00000606980 481 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 uc_338.22-201ENST00000622722 187 ntBASIC-0.61□□□□□ -2.51
HMGA1P17096 RNU6-115P-201ENST00000364310 107 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 RNU6-512P-201ENST00000364438 103 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 SUGT1P1-201ENST00000379514 476 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 RNU6-657P-201ENST00000383904 107 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 RNU6-756P-201ENST00000383997 107 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 SNORD75.1-201ENST00000408373 60 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.62□□□□□ -2.51
HMGA1P17096 RPS15AP10-201ENST00000432472 382 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.62□□□□□ -2.51
HMGA1P17096 RPS29P8-201ENST00000445109 171 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.62□□□□□ -2.51
HMGA1P17096 ELOCP24-201ENST00000456370 334 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 MTCO2P18-201ENST00000457151 658 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-0.62□□□□□ -2.51
HMGA1P17096 MIR4782-201ENST00000577987 79 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 BNIP3P30-201ENST00000601184 574 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 AC016252.1-201ENST00000609721 474 ntBASIC-0.62□□□□□ -2.51
HMGA1P17096 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
HMGA1P17096 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 RNU4-9P-201ENST00000364951 139 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
HMGA1P17096 RNA5SP25-201ENST00000410815 110 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 RNU4-27P-201ENST00000410889 139 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 RN7SKP142-201ENST00000411236 328 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 MTND1P30-201ENST00000441241 901 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 BTF3P15-201ENST00000455606 336 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 RNU6-758P-201ENST00000516292 89 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.63□□□□□ -2.51
HMGA1P17096 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.63□□□□□ -2.51
HMGA1P17096 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.63□□□□□ -2.51
HMGA1P17096 AL929325.1-201ENST00000603096 117 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 DPPA3P3-201ENST00000603842 430 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 AL603839.4-201ENST00000624658 1005 ntBASIC-0.63□□□□□ -2.51
HMGA1P17096 RNU6-994P-201ENST00000410507 111 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 RPS26P42-201ENST00000413485 326 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 MRPS36P1-201ENST00000421291 307 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 RPL17P35-201ENST00000432217 549 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.64□□□□□ -2.51
HMGA1P17096 OR9P1P-201ENST00000496431 281 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 AC104136.1-201ENST00000512969 394 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 AF038458.1-201ENST00000588406 262 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 AC005176.2-201ENST00000596933 147 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.64□□□□□ -2.51
HMGA1P17096 FAM157A-202ENST00000615155 405 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.64□□□□□ -2.51
HMGA1P17096 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.64□□□□□ -2.51
HMGA1P17096 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
HMGA1P17096 MIR103A2-201ENST00000362154 78 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 MIR18A-201ENST00000362310 71 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 SNORD115-24-201ENST00000363528 82 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 RNA5SP368-201ENST00000364298 116 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 SNORD49B-201ENST00000365172 72 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 MIR196A2-201ENST00000385189 110 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 RNA5SP109-201ENST00000391010 116 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 SNORD83.1-201ENST00000411362 77 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 AC027644.1-201ENST00000419595 298 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 AL353997.1-201ENST00000432936 108 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 MTND4P19-201ENST00000446659 478 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 MTND3P4-201ENST00000453537 303 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 FABP5P15-201ENST00000453566 214 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.65□□□□□ -2.51
HMGA1P17096 HMGN2P26-201ENST00000463169 339 ntBASIC-0.65□□□□□ -2.51
HMGA1P17096 AC091021.1-201ENST00000468051 388 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms