Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PDGFRAP16234 Y_RNA.9-201ENST00000362354 101 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 SNORD114-1-201ENST00000362705 72 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 RNY4P14-201ENST00000363656 96 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 Y_RNA.256-201ENST00000364594 104 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 SNORA51.11-201ENST00000384442 131 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 SNORA12-201ENST00000391162 147 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 MIR450B-201ENST00000401182 78 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 RNU2-40P-201ENST00000410833 196 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 MTCO1P21-201ENST00000416634 589 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.11□□□□□ -2.07
PDGFRAP16234 MRPS10P2-201ENST00000431226 381 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 AL445646.1-201ENST00000431784 216 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 NDUFA5P4-201ENST00000436704 385 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PDGFRAP16234 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 snoU13.15-201ENST00000459407 104 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 U8.21-201ENST00000459536 136 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 AC104564.1-201ENST00000493028 407 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.11□□□□□ -2.07
PDGFRAP16234 MRPS17P9-201ENST00000511924 393 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.11□□□□□ -2.07
PDGFRAP16234 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
PDGFRAP16234 AC016256.1-201ENST00000547971 354 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 AP000654.2-201ENST00000605633 586 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 AC012557.2-201ENST00000605919 418 ntBASIC2.11□□□□□ -2.07
PDGFRAP16234 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.11□□□□□ -2.07
PDGFRAP16234 AC009541.1-201ENST00000438279 2662 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PDGFRAP16234 RNU6-254P-201ENST00000363377 107 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 RNU6-1090P-201ENST00000364065 94 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 RNU6-743P-201ENST00000364151 106 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 RNU6-26P-201ENST00000383985 107 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 SNORD14D-201ENST00000384390 87 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 SNRPEP10-201ENST00000420249 274 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.1□□□□□ -2.07
PDGFRAP16234 HMGN2P26-201ENST00000463169 339 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 AC093259.1-201ENST00000509755 300 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.1□□□□□ -2.07
PDGFRAP16234 Y_RNA.665-201ENST00000516177 98 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 HSPE1P18-201ENST00000517602 280 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.1□□□□□ -2.07
PDGFRAP16234 CYP4A27P-201ENST00000567218 190 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 AC005034.5-201ENST00000604219 466 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 Z98751.3-201ENST00000604447 521 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 AC104458.1-201ENST00000608243 463 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 PCGEM1.1-201ENST00000613431 131 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
PDGFRAP16234 AC005520.5-201ENST00000613926 164 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 U4.5-201ENST00000617137 123 ntBASIC2.1□□□□□ -2.07
PDGFRAP16234 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PDGFRAP16234 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
PDGFRAP16234 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDGFRAP16234 MTND4P1-201ENST00000457501 1466 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 RNU6-1317P-201ENST00000364582 104 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 Y_RNA.373-201ENST00000365600 103 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PDGFRAP16234 Y_RNA.516-201ENST00000384541 124 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 Y_RNA.554-201ENST00000384672 102 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
PDGFRAP16234 RNU2-2P-201ENST00000410396 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 Y_RNA.615-201ENST00000410769 117 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 RNA5SP450-201ENST00000411206 102 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 EIF1AXP1-201ENST00000419267 435 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 C8orf59P1-201ENST00000429930 303 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.09□□□□□ -2.07
PDGFRAP16234 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.09□□□□□ -2.07
PDGFRAP16234 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.09□□□□□ -2.07
PDGFRAP16234 AMD1P1-201ENST00000457220 922 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 AC114801.2-201ENST00000503825 781 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 RNU6-1332P-201ENST00000516666 104 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.09□□□□□ -2.07
PDGFRAP16234 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.15-201ENST00000611544 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.16-201ENST00000613119 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.12-201ENST00000613778 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.20-201ENST00000613956 192 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.9-201ENST00000615427 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 AC005296.1-201ENST00000616145 209 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.11-201ENST00000616345 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.2-201ENST00000616535 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.3-201ENST00000617785 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.19-201ENST00000618602 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 RNU2-1-201ENST00000618664 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.6-201ENST00000619225 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.5-201ENST00000619465 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 U2.10-201ENST00000620268 191 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 AL136221.1-201ENST00000621449 509 ntBASIC2.09□□□□□ -2.07
PDGFRAP16234 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.09□□□□□ -2.07
PDGFRAP16234 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PDGFRAP16234 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.08
PDGFRAP16234 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PDGFRAP16234 Y_RNA.99-201ENST00000363138 105 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 U3.9-201ENST00000363823 204 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 RNU6-128P-201ENST00000383976 107 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 AC012306.1-201ENST00000423267 114 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms