Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.32□□□□□ -1.56
CD44P16070 AC007225.2-201ENST00000562529 256 ntBASIC5.32□□□□□ -1.56
CD44P16070 AC233702.9-201ENST00000581528 203 ntBASIC5.32□□□□□ -1.56
CD44P16070 MIR3199-2-201ENST00000636243 86 ntBASIC5.32□□□□□ -1.56
CD44P16070 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD44P16070 UBE3AP2-201ENST00000429033 2259 ntBASIC5.32□□□□□ -1.56
CD44P16070 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.32□□□□□ -1.56
CD44P16070 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD44P16070 INTS6P1-201ENST00000504674 2530 ntBASIC5.32□□□□□ -1.56
CD44P16070 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CD44P16070 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD44P16070 FAM35DP-201ENST00000323387 2712 ntBASIC5.32□□□□□ -1.56
CD44P16070 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD44P16070 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD44P16070 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CD44P16070 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.31□□□□□ -1.56
CD44P16070 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CD44P16070 RNU6-748P-201ENST00000384648 107 ntBASIC5.31□□□□□ -1.56
CD44P16070 SNORD96B-201ENST00000386148 79 ntBASIC5.31□□□□□ -1.56
CD44P16070 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD44P16070 RNU7-14P-201ENST00000459331 62 ntBASIC5.31□□□□□ -1.56
CD44P16070 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.31□□□□□ -1.56
CD44P16070 SNORA18.7-201ENST00000516910 131 ntBASIC5.31□□□□□ -1.56
CD44P16070 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.31□□□□□ -1.56
CD44P16070 AC002984.1-201ENST00000591692 448 ntBASIC5.31□□□□□ -1.56
CD44P16070 AL121932.1-201ENST00000605542 214 ntBASIC5.31□□□□□ -1.56
CD44P16070 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD44P16070 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD44P16070 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD44P16070 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD44P16070 RNU6-1163P-201ENST00000364516 107 ntBASIC5.3□□□□□ -1.56
CD44P16070 MIR493-201ENST00000385254 89 ntBASIC5.3□□□□□ -1.56
CD44P16070 U3.30-201ENST00000391308 210 ntBASIC5.3□□□□□ -1.56
CD44P16070 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.3□□□□□ -1.56
CD44P16070 RPS27P18-201ENST00000431701 247 ntBASIC5.3□□□□□ -1.56
CD44P16070 PPIAP20-201ENST00000449839 135 ntBASIC5.3□□□□□ -1.56
CD44P16070 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.3□□□□□ -1.56
CD44P16070 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.3□□□□□ -1.56
CD44P16070 AC140172.1-201ENST00000502928 141 ntBASIC5.3□□□□□ -1.56
CD44P16070 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.3□□□□□ -1.56
CD44P16070 MIR6729-201ENST00000618194 65 ntBASIC5.3□□□□□ -1.56
CD44P16070 MIR6886-201ENST00000619864 61 ntBASIC5.3□□□□□ -1.56
CD44P16070 AC009487.4-201ENST00000624969 3585 ntBASIC5.3□□□□□ -1.56
CD44P16070 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.3□□□□□ -1.56
CD44P16070 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD44P16070 AL133412.1-201ENST00000380194 2992 ntBASIC5.3□□□□□ -1.56
CD44P16070 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.29□□□□□ -1.56
CD44P16070 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD44P16070 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CD44P16070 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD44P16070 RNU4-82P-201ENST00000362443 140 ntBASIC5.29□□□□□ -1.56
CD44P16070 RNU6-649P-201ENST00000384463 107 ntBASIC5.29□□□□□ -1.56
CD44P16070 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.29□□□□□ -1.56
CD44P16070 MIR5699-201ENST00000578903 90 ntBASIC5.29□□□□□ -1.56
CD44P16070 AC209154.1-201ENST00000582156 337 ntBASIC5.29□□□□□ -1.56
CD44P16070 AC012493.2-201ENST00000595083 291 ntBASIC5.29□□□□□ -1.56
CD44P16070 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CD44P16070 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CD44P16070 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.29□□□□□ -1.56
CD44P16070 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.29□□□□□ -1.56
CD44P16070 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CD44P16070 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CD44P16070 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CD44P16070 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CD44P16070 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CD44P16070 RNA5SP435-201ENST00000364044 108 ntBASIC5.28□□□□□ -1.56
CD44P16070 Y_RNA.247-201ENST00000364500 92 ntBASIC5.28□□□□□ -1.56
CD44P16070 RNU6-499P-201ENST00000365615 107 ntBASIC5.28□□□□□ -1.56
CD44P16070 SNORA11.3-201ENST00000408471 128 ntBASIC5.28□□□□□ -1.56
CD44P16070 AL445646.1-201ENST00000431784 216 ntBASIC5.28□□□□□ -1.56
CD44P16070 RNU6-634P-201ENST00000459134 106 ntBASIC5.28□□□□□ -1.56
CD44P16070 AC015912.2-201ENST00000571053 181 ntBASIC5.28□□□□□ -1.56
CD44P16070 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.28□□□□□ -1.56
CD44P16070 SUMO2P15-201ENST00000604285 278 ntBASIC5.28□□□□□ -1.56
CD44P16070 AC006441.5-201ENST00000612680 209 ntBASIC5.28□□□□□ -1.56
CD44P16070 MIR6862-1-201ENST00000613016 70 ntBASIC5.28□□□□□ -1.56
CD44P16070 MIR6862-2-201ENST00000614755 70 ntBASIC5.28□□□□□ -1.56
CD44P16070 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.28□□□□□ -1.56
CD44P16070 SNORA11.6-201ENST00000619030 128 ntBASIC5.28□□□□□ -1.56
CD44P16070 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CD44P16070 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CD44P16070 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CD44P16070 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD44P16070 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD44P16070 RNU6-471P-201ENST00000383944 106 ntBASIC5.27□□□□□ -1.57
CD44P16070 MIR765-201ENST00000390226 114 ntBASIC5.27□□□□□ -1.57
CD44P16070 SNORD77B-201ENST00000391112 67 ntBASIC5.27□□□□□ -1.57
CD44P16070 RPS26P2-201ENST00000440331 348 ntBASIC5.27□□□□□ -1.57
CD44P16070 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CD44P16070 AL450471.1-201ENST00000447509 127 ntBASIC5.27□□□□□ -1.57
CD44P16070 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.27□□□□□ -1.57
CD44P16070 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.27□□□□□ -1.57
CD44P16070 RN7SKP46-201ENST00000515942 234 ntBASIC5.27□□□□□ -1.57
CD44P16070 RNA5SP228-201ENST00000516232 133 ntBASIC5.27□□□□□ -1.57
CD44P16070 RNA5SP34-201ENST00000516887 130 ntBASIC5.27□□□□□ -1.57
CD44P16070 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.27□□□□□ -1.57
CD44P16070 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC5.27□□□□□ -1.57
CD44P16070 AC093591.2-201ENST00000565254 3843 ntBASIC5.27□□□□□ -1.57
CD44P16070 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC5.27□□□□□ -1.57
CD44P16070 AC022726.1-201ENST00000587475 207 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms