Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.05□□□□□ -2.58
VCANP13611 AP000860.1-201ENST00000605250 559 ntBASIC-1.05□□□□□ -2.58
VCANP13611 AC006963.1-201ENST00000624003 1052 ntBASIC-1.05□□□□□ -2.58
VCANP13611 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.05□□□□□ -2.58
VCANP13611 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-1.05□□□□□ -2.58
VCANP13611 AC133104.1-201ENST00000429100 218 ntBASIC-1.05□□□□□ -2.58
VCANP13611 AC011195.1-201ENST00000578177 177 ntBASIC-1.05□□□□□ -2.58
VCANP13611 AC009032.1-201ENST00000617574 431 ntBASIC-1.05□□□□□ -2.58
VCANP13611 MIR204-201ENST00000385200 110 ntBASIC-1.05□□□□□ -2.58
VCANP13611 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-1.05□□□□□ -2.58
VCANP13611 RNU6-420P-201ENST00000458780 107 ntBASIC-1.05□□□□□ -2.58
VCANP13611 PTP4A1P4-201ENST00000512479 322 ntBASIC-1.05□□□□□ -2.58
VCANP13611 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-1.05□□□□□ -2.58
VCANP13611 AC015688.6-201ENST00000577737 104 ntBASIC-1.05□□□□□ -2.58
VCANP13611 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.06□□□□□ -2.58
VCANP13611 MTCYBP11-201ENST00000447254 1109 ntBASIC-1.06□□□□□ -2.58
VCANP13611 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC-1.06□□□□□ -2.58
VCANP13611 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-1.06□□□□□ -2.58
VCANP13611 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.06□□□□□ -2.58
VCANP13611 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.06□□□□□ -2.58
VCANP13611 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-1.06□□□□□ -2.58
VCANP13611 SCARNA18B-201ENST00000458806 135 ntBASIC-1.06□□□□□ -2.58
VCANP13611 AC079382.1-201ENST00000493346 557 ntBASIC-1.06□□□□□ -2.58
VCANP13611 MTCO3P9-201ENST00000506989 781 ntBASIC-1.06□□□□□ -2.58
VCANP13611 RNU6-581P-201ENST00000516214 105 ntBASIC-1.06□□□□□ -2.58
VCANP13611 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC-1.07□□□□□ -2.58
VCANP13611 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
VCANP13611 AC108157.1-201ENST00000510511 539 ntBASIC-1.07□□□□□ -2.58
VCANP13611 AC026271.5-201ENST00000577873 130 ntBASIC-1.07□□□□□ -2.58
VCANP13611 SNORD39.2-201ENST00000579995 76 ntBASIC-1.07□□□□□ -2.58
VCANP13611 AC095031.1-201ENST00000623685 672 ntBASIC-1.07□□□□□ -2.58
VCANP13611 PCNPP3-201ENST00000393579 471 ntBASIC-1.07□□□□□ -2.58
VCANP13611 RNU6-177P-201ENST00000411257 104 ntBASIC-1.07□□□□□ -2.58
VCANP13611 MTND1P28-201ENST00000435623 950 ntBASIC-1.07□□□□□ -2.58
VCANP13611 AL133264.1-201ENST00000407157 562 ntBASIC-1.07□□□□□ -2.58
VCANP13611 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-1.07□□□□□ -2.58
VCANP13611 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
VCANP13611 RNU6-980P-201ENST00000516925 103 ntBASIC-1.07□□□□□ -2.58
VCANP13611 BNIP3P27-201ENST00000599991 412 ntBASIC-1.07□□□□□ -2.58
VCANP13611 AC093838.1-201ENST00000613014 469 ntBASIC-1.07□□□□□ -2.58
VCANP13611 RNA5SP517-201ENST00000364724 117 ntBASIC-1.08□□□□□ -2.58
VCANP13611 Y_RNA.423-201ENST00000384057 113 ntBASIC-1.08□□□□□ -2.58
VCANP13611 RNU6-360P-201ENST00000390944 104 ntBASIC-1.08□□□□□ -2.58
VCANP13611 RNA5SP95-201ENST00000410319 137 ntBASIC-1.08□□□□□ -2.58
VCANP13611 MTCO3P5-201ENST00000433620 714 ntBASIC-1.08□□□□□ -2.58
VCANP13611 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-1.08□□□□□ -2.58
VCANP13611 RPL32P14-201ENST00000463196 378 ntBASIC-1.08□□□□□ -2.58
VCANP13611 NACAP3-201ENST00000552100 481 ntBASIC-1.08□□□□□ -2.58
VCANP13611 AC012213.3-201ENST00000577199 777 ntBASIC-1.08□□□□□ -2.58
VCANP13611 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-1.08□□□□□ -2.58
VCANP13611 AL603758.1-201ENST00000618654 241 ntBASIC-1.08□□□□□ -2.58
VCANP13611 RNU5D-1-201ENST00000363299 116 ntBASIC-1.08□□□□□ -2.58
VCANP13611 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.08□□□□□ -2.58
VCANP13611 HNRNPDLP3-201ENST00000456745 380 ntBASIC-1.08□□□□□ -2.58
VCANP13611 AC130324.3-201ENST00000614165 542 ntBASIC-1.08□□□□□ -2.58
VCANP13611 MT-TM-201ENST00000387377 68 ntBASIC-1.08□□□□□ -2.58
VCANP13611 MIR760-201ENST00000390220 80 ntBASIC-1.08□□□□□ -2.58
VCANP13611 RNA5SP33-201ENST00000516687 98 ntBASIC-1.08□□□□□ -2.58
VCANP13611 AL132657.2-201ENST00000564417 358 ntBASIC-1.08□□□□□ -2.58
VCANP13611 MIR3139-201ENST00000579145 76 ntBASIC-1.08□□□□□ -2.58
VCANP13611 MIR4765-201ENST00000585007 77 ntBASIC-1.08□□□□□ -2.58
VCANP13611 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC-1.08□□□□□ -2.58
VCANP13611 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.09□□□□□ -2.58
VCANP13611 AL359385.1-201ENST00000456509 365 ntBASIC-1.09□□□□□ -2.58
VCANP13611 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.09□□□□□ -2.58
VCANP13611 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-1.09□□□□□ -2.58
VCANP13611 AF235103.2-201ENST00000525753 346 ntBASIC-1.09□□□□□ -2.58
VCANP13611 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-1.09□□□□□ -2.58
VCANP13611 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC-1.09□□□□□ -2.58
VCANP13611 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-1.09□□□□□ -2.58
VCANP13611 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-1.09□□□□□ -2.58
VCANP13611 TIMM9P1-201ENST00000436122 256 ntBASIC-1.09□□□□□ -2.58
VCANP13611 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-1.09□□□□□ -2.58
VCANP13611 BBIP1P1-201ENST00000602999 279 ntBASIC-1.09□□□□□ -2.58
VCANP13611 AC246785.4-201ENST00000605374 287 ntBASIC-1.09□□□□□ -2.58
VCANP13611 AL355810.1-201ENST00000614629 552 ntBASIC-1.09□□□□□ -2.58
VCANP13611 MIR4496-201ENST00000635896 61 ntBASIC-1.09□□□□□ -2.58
VCANP13611 RNU4-66P-201ENST00000365199 138 ntBASIC-1.1□□□□□ -2.58
VCANP13611 AC005021.1-201ENST00000608730 355 ntBASIC-1.1□□□□□ -2.58
VCANP13611 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.1□□□□□ -2.59
VCANP13611 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.1□□□□□ -2.59
VCANP13611 AL160275.3-201ENST00000423876 471 ntBASIC-1.1□□□□□ -2.59
VCANP13611 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-1.1□□□□□ -2.59
VCANP13611 RNU5E-1-201ENST00000362477 120 ntBASIC-1.1□□□□□ -2.59
VCANP13611 RNU6-1083P-201ENST00000384022 107 ntBASIC-1.1□□□□□ -2.59
VCANP13611 RNU6-811P-201ENST00000384069 107 ntBASIC-1.1□□□□□ -2.59
VCANP13611 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.1□□□□□ -2.59
VCANP13611 MIR4520-1-201ENST00000582609 70 ntBASIC-1.1□□□□□ -2.59
VCANP13611 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-1.1□□□□□ -2.59
VCANP13611 PNPLA4P1-201ENST00000458328 305 ntBASIC-1.11□□□□□ -2.59
VCANP13611 RNU6-953P-201ENST00000459154 107 ntBASIC-1.11□□□□□ -2.59
VCANP13611 RBBP4P6-201ENST00000508098 202 ntBASIC-1.11□□□□□ -2.59
VCANP13611 AC010493.1-201ENST00000513479 292 ntBASIC-1.11□□□□□ -2.59
VCANP13611 SCARNA3-201ENST00000517097 143 ntBASIC-1.11□□□□□ -2.59
VCANP13611 AC008536.2-201ENST00000607284 349 ntBASIC-1.11□□□□□ -2.59
VCANP13611 AC119674.1-220ENST00000641502 1048 ntBASIC-1.11□□□□□ -2.59
VCANP13611 MTND5P31-201ENST00000419366 1374 ntBASIC-1.11□□□□□ -2.59
VCANP13611 AC096586.2-201ENST00000610260 441 ntBASIC-1.11□□□□□ -2.59
VCANP13611 UBE2V1P15-201ENST00000407776 448 ntBASIC-1.11□□□□□ -2.59
VCANP13611 AC099677.2-201ENST00000436385 175 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms