Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.12□□□□□ -2.43
COL6A3P12111 AC010587.2-201ENST00000511727 448 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6-965P-201ENST00000516721 96 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A3P12111 AC079598.5-201ENST00000547460 117 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL6A3P12111 AC091057.3-201ENST00000602684 733 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AC104408.1-201ENST00000605241 170 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AC004067.1-201ENST00000608733 700 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AC079416.3-201ENST00000624479 549 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 CASC19-280ENST00000642102 1351 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 MT-TM-201ENST00000387377 68 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.12□□□□□ -2.43
COL6A3P12111 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AC008267.5-201ENST00000424928 265 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A3P12111 AC093422.3-201ENST00000428506 305 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A3P12111 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A3P12111 AC097473.1-201ENST00000508142 408 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A3P12111 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A3P12111 AL391001.1-201ENST00000602747 715 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL6A3P12111 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A3P12111 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A3P12111 SNORA18.1-201ENST00000363418 128 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6-898P-201ENST00000365627 104 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6-444P-201ENST00000383988 108 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNY1P7-201ENST00000384743 110 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RNU6-952P-201ENST00000391164 108 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 MIR1185-1-201ENST00000408598 86 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A3P12111 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A3P12111 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.12□□□□□ -2.43
COL6A3P12111 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.12□□□□□ -2.43
COL6A3P12111 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.12□□□□□ -2.43
COL6A3P12111 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.12□□□□□ -2.43
COL6A3P12111 AC011005.2-201ENST00000487324 359 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AL160314.1-201ENST00000490836 438 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 RN7SKP256-201ENST00000517201 314 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
COL6A3P12111 SNORD39.3-201ENST00000584451 71 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AC090330.1-201ENST00000588646 764 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.12□□□□□ -2.43
COL6A3P12111 AL031281.1-201ENST00000604049 488 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AC018926.1-201ENST00000616335 435 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 AP003072.5-201ENST00000623872 773 ntBASIC-0.12□□□□□ -2.43
COL6A3P12111 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 RNU1-39P-201ENST00000383897 165 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 MIR548L-201ENST00000408303 86 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL6A3P12111 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 RAD1P2-201ENST00000446414 663 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.13□□□□□ -2.43
COL6A3P12111 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL6A3P12111 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL6A3P12111 AC116655.1-201ENST00000508324 901 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC022483.1-201ENST00000514020 567 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL6A3P12111 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL6A3P12111 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL6A3P12111 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL6A3P12111 AC138749.5-201ENST00000611461 208 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC078938.1-201ENST00000620993 318 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AL590396.2-201ENST00000636511 1041 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL6A3P12111 MIR18A-201ENST00000362310 71 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 RNU4-84P-201ENST00000364200 139 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 RNU6-31P-201ENST00000384388 108 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.13□□□□□ -2.43
COL6A3P12111 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL6A3P12111 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.13□□□□□ -2.43
COL6A3P12111 LINC01399-202ENST00000458450 244 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC130509.1-201ENST00000464158 433 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL6A3P12111 MTND1P22-201ENST00000510572 951 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC239868.4-201ENST00000608318 671 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AC107075.1-201ENST00000613695 314 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 AL159972.1-201ENST00000625150 448 ntBASIC-0.13□□□□□ -2.43
COL6A3P12111 MIR103A2-201ENST00000362154 78 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RNA5SP264-201ENST00000363115 107 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MLLT10P1-201ENST00000418346 262 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 TIMM9P1-201ENST00000436122 256 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC104982.1-201ENST00000478775 574 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MTATP6P9-201ENST00000515039 680 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 SNORA25.12-201ENST00000516202 82 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RNU6-320P-201ENST00000516511 106 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms