Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RMST_4.1-201ENST00000616886 107 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 AC009159.2-201ENST00000617603 606 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 AC091931.1-201ENST00000623488 728 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 MIR1248-201ENST00000629190 106 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 RNA5SP257-201ENST00000363023 116 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 RNA5SP457-201ENST00000363657 124 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 RNU4-56P-201ENST00000364700 142 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 RNU6-195P-201ENST00000411352 109 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 BX295541.1-201ENST00000417774 250 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 C1DP2-201ENST00000418167 426 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A2P08572 AC013410.2-201ENST00000422627 201 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A2P08572 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A2P08572 AC009961.2-201ENST00000435771 251 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.95□□□□□ -2.26
COL4A2P08572 AC087884.1-201ENST00000469738 328 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 AC022447.4-201ENST00000504053 364 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.95□□□□□ -2.26
COL4A2P08572 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.95□□□□□ -2.26
COL4A2P08572 RNU6-410P-201ENST00000517006 107 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 DEFB108E-201ENST00000524692 240 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL4A2P08572 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.95□□□□□ -2.26
COL4A2P08572 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.95□□□□□ -2.26
COL4A2P08572 MIR4775-201ENST00000581168 75 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 AC130454.1-201ENST00000622948 401 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 Z69720.2-201ENST00000624755 279 ntBASIC0.95□□□□□ -2.26
COL4A2P08572 RNA5SP493-201ENST00000364115 91 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 RNU6-434P-201ENST00000384376 107 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
COL4A2P08572 AC009310.1-201ENST00000414414 451 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 MTND2P18-201ENST00000419962 1030 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.94□□□□□ -2.26
COL4A2P08572 CYCSP46-201ENST00000423569 204 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AC078809.1-201ENST00000427601 140 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A2P08572 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.94□□□□□ -2.26
COL4A2P08572 RNU6-1132P-201ENST00000459214 107 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A2P08572 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL4A2P08572 SNORA44.1-201ENST00000517031 108 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A2P08572 AP001372.4-201ENST00000524889 472 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.94□□□□□ -2.26
COL4A2P08572 AC245014.2-201ENST00000603689 287 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AC018889.1-201ENST00000605372 397 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AC246785.4-201ENST00000605374 287 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AP000654.2-201ENST00000605633 586 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AL121992.2-201ENST00000606262 256 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
COL4A2P08572 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AL603839.4-201ENST00000624658 1005 ntBASIC0.94□□□□□ -2.26
COL4A2P08572 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-78P-201ENST00000362897 107 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-181P-201ENST00000363225 107 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-105P-201ENST00000363909 104 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-1141P-201ENST00000364520 107 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-438P-201ENST00000365561 103 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-45P-201ENST00000384471 107 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-393P-201ENST00000384475 107 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-1274P-201ENST00000384557 107 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 MIR454-201ENST00000390180 115 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU1-78P-201ENST00000391248 165 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 MIR934-201ENST00000401241 83 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 AL357139.1-201ENST00000407792 426 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.93□□□□□ -2.26
COL4A2P08572 EIF4EP2-201ENST00000422816 654 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 AL445305.1-201ENST00000432577 575 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 AL596276.1-201ENST00000434465 418 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.93□□□□□ -2.26
COL4A2P08572 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.93□□□□□ -2.26
COL4A2P08572 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.93□□□□□ -2.26
COL4A2P08572 AC079382.1-201ENST00000493346 557 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.93□□□□□ -2.26
COL4A2P08572 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-759P-201ENST00000516740 103 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-445P-201ENST00000516949 107 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 RNU6-1220P-201ENST00000517126 108 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 AC109479.2-201ENST00000517842 174 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.93□□□□□ -2.26
COL4A2P08572 AC009094.1-201ENST00000564443 426 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 MIR3198-2-201ENST00000577868 80 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 MIR3923-201ENST00000579521 83 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 MIR3136-201ENST00000583498 78 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.93□□□□□ -2.26
COL4A2P08572 AC099654.13-201ENST00000639774 207 ntBASIC0.93□□□□□ -2.26
COL4A2P08572 MIR126-201ENST00000362291 85 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 Y_RNA.99-201ENST00000363138 105 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 Y_RNA.132-201ENST00000363421 102 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNU6-1164P-201ENST00000364428 107 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNU6-43P-201ENST00000384302 107 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNU6-1105P-201ENST00000384774 107 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNU6-1106P-201ENST00000390845 107 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNU6-360P-201ENST00000390944 104 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 RNA5SP501-201ENST00000410990 112 ntBASIC0.92□□□□□ -2.26
COL4A2P08572 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms