Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SYPP08247 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SYPP08247 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
SYPP08247 AP001486.2-201ENST00000561652 5113 ntBASIC3.62□□□□□ -1.83
SYPP08247 BX322639.1-202ENST00000423987 2213 ntBASIC3.62□□□□□ -1.83
SYPP08247 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SYPP08247 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 AL353746.1-201ENST00000566293 6881 ntBASIC3.61□□□□□ -1.83
SYPP08247 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.61□□□□□ -1.83
SYPP08247 RNU6-799P-201ENST00000363567 107 ntBASIC3.61□□□□□ -1.83
SYPP08247 Y_RNA.179-201ENST00000363844 90 ntBASIC3.61□□□□□ -1.83
SYPP08247 AL161651.1-201ENST00000440882 223 ntBASIC3.61□□□□□ -1.83
SYPP08247 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.61□□□□□ -1.83
SYPP08247 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.61□□□□□ -1.83
SYPP08247 RNU6-625P-201ENST00000459412 107 ntBASIC3.61□□□□□ -1.83
SYPP08247 AP001324.2-201ENST00000461163 319 ntBASIC3.61□□□□□ -1.83
SYPP08247 RPS4XP13-201ENST00000483219 789 ntBASIC3.61□□□□□ -1.83
SYPP08247 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.61□□□□□ -1.83
SYPP08247 RNU1-61P-201ENST00000516107 151 ntBASIC3.61□□□□□ -1.83
SYPP08247 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.61□□□□□ -1.83
SYPP08247 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.61□□□□□ -1.83
SYPP08247 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.61□□□□□ -1.83
SYPP08247 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.61□□□□□ -1.83
SYPP08247 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.61□□□□□ -1.83
SYPP08247 AC132825.6-201ENST00000638861 357 ntBASIC3.61□□□□□ -1.83
SYPP08247 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SYPP08247 CEP170P1-201ENST00000502249 4587 ntBASIC3.61□□□□□ -1.83
SYPP08247 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SYPP08247 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYPP08247 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.6□□□□□ -1.83
SYPP08247 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYPP08247 Y_RNA.101-201ENST00000363154 102 ntBASIC3.6□□□□□ -1.83
SYPP08247 RNU6-923P-201ENST00000364753 107 ntBASIC3.6□□□□□ -1.83
SYPP08247 SNORA72.2-201ENST00000365028 127 ntBASIC3.6□□□□□ -1.83
SYPP08247 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYPP08247 RNY1P5-201ENST00000383890 115 ntBASIC3.6□□□□□ -1.83
SYPP08247 RNU6-245P-201ENST00000384020 107 ntBASIC3.6□□□□□ -1.83
SYPP08247 Y_RNA.435-201ENST00000384095 112 ntBASIC3.6□□□□□ -1.83
SYPP08247 RNU6-793P-201ENST00000384233 104 ntBASIC3.6□□□□□ -1.83
SYPP08247 SNORA1.3-201ENST00000384676 136 ntBASIC3.6□□□□□ -1.83
SYPP08247 MIR549A-201ENST00000385268 96 ntBASIC3.6□□□□□ -1.83
SYPP08247 MIR1183-201ENST00000408856 89 ntBASIC3.6□□□□□ -1.83
SYPP08247 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.6□□□□□ -1.83
SYPP08247 RAB28P5-201ENST00000427490 651 ntBASIC3.6□□□□□ -1.83
SYPP08247 AC091179.3-201ENST00000474761 144 ntBASIC3.6□□□□□ -1.83
SYPP08247 RPL31P61-201ENST00000496160 376 ntBASIC3.6□□□□□ -1.83
SYPP08247 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
SYPP08247 RNY3P16-201ENST00000516338 101 ntBASIC3.6□□□□□ -1.83
SYPP08247 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.6□□□□□ -1.83
SYPP08247 CYP4A27P-201ENST00000567218 190 ntBASIC3.6□□□□□ -1.83
SYPP08247 AL356575.1-201ENST00000603008 283 ntBASIC3.6□□□□□ -1.83
SYPP08247 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.6□□□□□ -1.83
SYPP08247 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYPP08247 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYPP08247 AC002543.1-201ENST00000299783 1954 ntBASIC3.6□□□□□ -1.83
SYPP08247 AC093010.3-201ENST00000570269 15214 ntBASIC3.6□□□□□ -1.83
SYPP08247 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
SYPP08247 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SYPP08247 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.59□□□□□ -1.83
SYPP08247 SNORD113-1-201ENST00000365321 69 ntBASIC3.59□□□□□ -1.83
SYPP08247 SNORA48.2-201ENST00000390926 124 ntBASIC3.59□□□□□ -1.83
SYPP08247 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
SYPP08247 MIR548I2-201ENST00000408348 149 ntBASIC3.59□□□□□ -1.83
SYPP08247 Y_RNA.597-201ENST00000410463 100 ntBASIC3.59□□□□□ -1.83
SYPP08247 ELOCP21-201ENST00000412558 336 ntBASIC3.59□□□□□ -1.83
SYPP08247 CYCSP48-201ENST00000417124 323 ntBASIC3.59□□□□□ -1.83
SYPP08247 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.59□□□□□ -1.83
SYPP08247 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.59□□□□□ -1.83
SYPP08247 SNORA71B-202ENST00000439232 272 ntBASIC3.59□□□□□ -1.83
SYPP08247 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.59□□□□□ -1.83
SYPP08247 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
SYPP08247 RNU2-27P-201ENST00000516185 142 ntBASIC3.59□□□□□ -1.83
SYPP08247 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.59□□□□□ -1.83
SYPP08247 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.59□□□□□ -1.83
SYPP08247 MIR4308-201ENST00000580634 81 ntBASIC3.59□□□□□ -1.83
SYPP08247 MIR3136-201ENST00000583498 78 ntBASIC3.59□□□□□ -1.83
SYPP08247 AL137849.1-201ENST00000604767 169 ntBASIC3.59□□□□□ -1.83
SYPP08247 AC005828.6-201ENST00000606610 232 ntBASIC3.59□□□□□ -1.83
SYPP08247 AC005520.5-201ENST00000613926 164 ntBASIC3.59□□□□□ -1.83
SYPP08247 SNORD98-201ENST00000636377 67 ntBASIC3.59□□□□□ -1.83
SYPP08247 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYPP08247 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SYPP08247 AC006504.1-201ENST00000562493 3666 ntBASIC3.59□□□□□ -1.84
SYPP08247 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SYPP08247 AC004944.1-201ENST00000517807 3059 ntBASIC3.59□□□□□ -1.84
SYPP08247 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
SYPP08247 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.59□□□□□ -1.84
SYPP08247 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.58□□□□□ -1.84
SYPP08247 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SYPP08247 AC099654.7-201ENST00000635788 2127 ntBASIC3.58□□□□□ -1.84
SYPP08247 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms